Strain | Pseudomonas sp. HMP271 Pseudomonas_HMP271_contig_10, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCCAGTTGGCCGTGCAGGCGGATCAGCTGTTCTTCCAGCAGGGCCAGGGTCTTCGGCACGCGAATCAGCACCAGATCGAACGGACCCTGGGCCACTTCGC TGGCCGGGACGAAACGCACACGCTCGGCCGGCAGCCCGTTGCGCGCGAGGTTCTTCTGCAGCGCCAGATGGGCCAGATGCGAATCGCCGCTGCTGGTCAC TTCGACATGCGCCGCCAGGGCGCAGGCCAGCGCGCCGAAGCTGTCGTTGAGGATCAGCACCCGCGTGGTCGCCGGCAGGGTGCGCGGATGCAGCTCGGCG AGCAGGTATTCGTCGGCGGCATCGAAGGCCTGCAGCGGCTCGTTCGGCTGCTCCGGCTGGCGGATCAGATCGAGGCGGGCGTAGGGCGTGTCGAGAATAG GCATGAGAACTGGCGGTGTTTGTCGGCGTCGGAAAGGAGTATCAAGGCGTTACGGACGCTGCGTGCGGCAGGTCCGACAGAGGCTCGGAGGGAGCGAAGT
|
|
DNA Sequence for Gene |
>DP64_RS12810
ATGACCGCCAGCGAAGAGAAGTTCACCCGCCAGCGCCTGCTCGAGGTGCAGACGCTGACGCCCAGCCTGTTCACCCTGCGCACCAGCCGCGATCCGGGAT TTCGTTTCAGCGCCGGCCAGTTCGCCCGCCTCGGCGTGCGCAAGCCCAGCGGCTGCGTTGTCTGGCGCGCCTATTCGATGGTCTCTGCGCCGCACGACGA GTTTCTCGACTTCTTCTCCATCGTCGTGCCGGACGGCGAGTTCACCAGCGAACTGAGCCGACTCAAGGTCGGCGACGAGCTGCTGATCGACAAGCAGGCC TTCGGCTTCCTGACCCTGGATCGTTTCCCCGATGGTCGCGACCTCTGGTTGTTGGCCACCGGCACCGGCATCGCGCCGTTCCTGTCGATCCTGCAGGATT TCCAGGCCTGGCAGCGTTTCGAGCGCATCATCCTCGTCTACAGCGTGCGCGAAGCGCGCGAGCTGGCCTATCAGCGGCTGATCGCCGAACTGCCGCAGCG CGAGTATCTGGAGGGACTGGGGTCGAAGCTGCTGTACCTGCCGGTGGTCACCCGCGAACAGGTGCCTGGCGCCCTGCACGCGCGCATCACCACGCTGATC GAGAGCGGCGAGCTGGAGCGCGCCGCCGATCTGCAGCTGACCCCCGAGCATTCGCGGATCATGCTCTGCGGCAACCCGCAGATGATCGAAGATACCCGCG CCGTGCTGAAGGCCCGCGACCTCAACCTCGCGCTGACCCGCAAGCCAGGACAGGTGGCGGTGGAGAATTACTGGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GCGGAGCGCCGCCCGGCCGCAGGGGGTGAAAAAAGATCCTGCGACTTGGCCATGCGTAGGGTGGATGGCCGAAGCCATCCACGCGCAACACCCTTTCGGC GCATGTGCCGCGTGGAAAATCGCTGCGCGAGTTTTCCACCCTACGGACAAGTCCGGCCCCCAAACGAAAAGCCCCCGCCGGACAACCCGGCGGGGGCTTT TCTTGTTGCGTGCAGCCTGGGGCTTGCGGTAGCGGTTACACCACGCCCTGGGCCAGCATGGCGTCGGCAACCTTGACGAAGCCGGCGATGTTGGCGCCCT TGACGTAGTTGATCCGGCCGTCCGCTTCCTCGCCGTAGGCGACGCAGGCGTGGTGGATCGACTGCATGATGCTGTGCAGCTTGGTGTCCACCTCGCCGGC GCTCCAGTGCAGGCGCATGGCGTTCTGGCTCATTTCCAGACCCGAGCAGGCCACGCCGCCGGCGTTGGAGGCCTTGCCCGGTGCGTAGAGGATGCCGGCC
|
|
Amino Acid Sequence |
>ferredoxin-NADP reductase
MTASEEKFTRQRLLEVQTLTPSLFTLRTSRDPGFRFSAGQFARLGVRKPSGCVVWRAYSMVSAPHDEFLDFFSIVVPDGEFTSELSRLKVGDELLIDKQA FGFLTLDRFPDGRDLWLLATGTGIAPFLSILQDFQAWQRFERIILVYSVREARELAYQRLIAELPQREYLEGLGSKLLYLPVVTREQVPGALHARITTLI ESGELERAADLQLTPEHSRIMLCGNPQMIEDTRAVLKARDLNLALTRKPGQVAVENYW
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|