Pseudomonas sp. HMP271, DP64_RS12440

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. HMP271 Pseudomonas_HMP271_contig_10, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGGCGCTGGCGCTGCAGGACGAGCTGCAGACCAAGTACACCGGCGGCACCGTGCTGCACCTGTACATGGCCGAGCAGATTTCCTCCACCGAGGCCTGCAA GAAGCTGGTGCGCAACGCGCTGTCGCGTTTCCGCCTGCCATACCTGACGGTGACGCCGACGTTCTCGATCTGCCCGGTGCACGGCTACCTGGCCGGCGAA CACGAGTTCTGCCCCAAGTGCGACGAGGCCCTGCTGCACAAGCAGCACGCCGAAGCGGCGTTGCCCGCCTGAGCTGCGACCGCATGCCCCGCAGCTCCGC GCGGTGCGGCGCTGCATACTCACACCCCAGCAAGTAAGGAGAAGCACCATGAGCCAAGCCAGCCAACTGCCCCAGGAACAGCGCCAGCGTTGTGAAGTCT GGACCCGCGTGATGGGCTACCACCGCCCGGTTGCGGCGTTCAACCCGGGCAAGCAGTCCGAACACCGCGAGCGCCTGCATTTCACCGAAGCGGCGGCGCG
DNA Sequence for Gene
>DP64_RS12440
GTGACAGCAGCGCTGCGGGTCGGGGGCCTCGTGCCCCTGACCACTCTGGATTTCCCCGATCACCTGGCCTGCGTGCTGTTCTGCCAGGGTTGCGGCTGGC GCTGCCGTTACTGCCACAACCCGCAGCTGATCCCCGCCTGCGGCAGCGAGGAAAAGTCCTGGGCAGAGATTCTCGATTTCCTCGAGCAGCGCATCGGCCT GCTCGAGGCGGTGGTGTTCAGCGGTGGCGAACCGACGCTGCAGACCGCGCTGCCGGACGCCATCGCCCAGGTGCGGGCGCTGGGTTACAAGGTCGGCCTG CACAGTGCCGGGATCAAGCCGAAGCTGTTCCGTCAGGTGCTGCCGCTGGTGGACTGGGTCGGCTTCGACATCAAGGCGCTGCCCGAGCAGAGCACGCTGA TCACCGGCGTCGAGGGCAGCGGCAAGGCCAACTGGAAGAGCCTCGACCATCTGCTGGAAAGTGGCGTCGAGCACGAGTGCCGGACCACCGTGCACTGGAA CCTATTCGATGCCGGGCTGCTCTGGGACATGGCCCAGCGCCTGCGCGCCCGCGGTGTCGAGCGCTTCGTGGTGCAGTGCGTGCGCACCGCGCGCATGCTC GACGCCAGCCTGGCCGACAGCACGGCGCCGTATGACCTGCAGCGTCTCTGGGAGCGCCTGGACCGGCTGTTCCCCTCGTTCGTGGTGCGCGGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGCACCGACTCAATCCAGCGGCAGCTCCGTGGTGCGCTTCACCTCGCTCATGGCGATGTGCGAGTGCGCCTCCTGCACATGCGGGCGCTGCAGCAGCTG GTCGCGCAGGAAGCGCTCGTAGCTGTCGATGTCCCGGGCCACCACCTTGAGCAGGTAGTCCGATTCGCCGGCCATGGTGTAGCACTCCAGCACCTCGGGA TAACCGACCACCGCCTGCTCGAACTCGTCCAGGTTGCTGCGCCCGTGCGCCGAGAGCTTGATGTTGACGAACACCGTCATGTTCAGCCCGAGCTTCTTCG GGTTGAGCAGGGCGACCTTGCGCTCGATCAGCCCTTCCTCCTGCATGCGGTTGATCCGGCGCCAGCAGGGCGATTGCGACAGCTCGACCTTTTCGGCGAT TTCCGCAGCGGACAGATCGGCGTTGTGCTGCAGCAGCAGGAGAATCTTGCGGTCGATGGGGCTGAGTGGAGAGGGCTGCATGGTTGTTCCTGTTTTATTG
Amino Acid Sequence
>radical SAM protein
MTAALRVGGLVPLTTLDFPDHLACVLFCQGCGWRCRYCHNPQLIPACGSEEKSWAEILDFLEQRIGLLEAVVFSGGEPTLQTALPDAIAQVRALGYKVGL HSAGIKPKLFRQVLPLVDWVGFDIKALPEQSTLITGVEGSGKANWKSLDHLLESGVEHECRTTVHWNLFDAGLLWDMAQRLRARGVERFVVQCVRTARML DASLADSTAPYDLQRLWERLDRLFPSFVVRG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site