Pseudomonas sp. HMP271, DP64_RS12395

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. HMP271 Pseudomonas_HMP271_contig_10, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGCGCACCGCACGCAGAGTTCGGCGCAGGAAATCCAGCAGATGATTGAGGAGCTGCAGGTCGGCGCCGGCGCCTCGGTGCAGACCATGACCGAAAGCCAG CGGCAGAGCGAAACCAGCGTGTCGATTGCCGATCGCGCCGGCGAGCGCCTTGGCGAGGTGACCCAGCGCATCGGCGAGATCGACGGCATGAACCAGTCGG TGGCCACCGCCACCGAGGAGCAGACCGCGGTGATCGAGTCGCTGAACATGGACATCACCGAGATCAACACGCTGAATCAGCAGGGCGTGGAGAACCTGCA GTCGACCCTGCGCGCCTGTGGCGACCTGGAACAGCAGGCCACCCGCCTCAAGCAGCTGGTGGGCAGCTTCCGCATCTGATTCCGGCGGGTTCACCAAGGG CGCTGCGGCGCCCTTTTTCTTGCGTGTGAACGGACAACGGAGCATCGCGCGGCGATTGGCAGTCACAACTGCTCACCCCGCGCATCCTTCAGGAGGCTCC
DNA Sequence for Gene
>DP64_RS12395
ATGAAAGTGCTCATCGTGCTCACATCCCACGACCGGCTGGGCGACACCGGCAAGCCCACCGGCTTCTGGCTCGAGGAATTCGCCGCACCGTACTTCGTGC TGCGCGACGCCGGCGCCGCCATCACGCTGGCCTCGCCCAATGGCGGGCAGCCGCCGCTGGACCCCAAGAGCGACGAAGCGGAGGCGCAGACCGACGCTAC CCGGCGCTTCAAGGCGGATGCCGAGGCGCAGCGCGCGCTGGCCAGCACCGTGCCGCTGGCACAGGTCTCGGCGGCGGATTTCGATGCGCTGTTCTTTCCC GGCGGCCACGGCCCGCTCTGGGACCTGGTGCGTGACCGCCACGCCATCGAACTGATCGAGACCTTTGCACGCAGCGGCAAACCGGTCGCGGCGGTCTGCC ATGCGCCGGCGGTGCTGACCGAAGTGCGCGGTGCGGATGGCGAGTTCCTGATCAAGGGACGCGGCGTCACCGGCTTCACCAACGGTGAGGAAGCGGCGGT GGAGCTGACCGAGGTGGTGCCCTTCCTGCTGGAAGACCGGCTCAAGGCGCGCGGCGGCAACTACAGCAAGGGACCGGACTGGGCGCCCTACGTGGTGGTC GACGGCCAGCTGGTGACCGGGCAGAACCCGGCCTCCTCGGAAGCCGCCGCAACGGCGCTGCTGGAGCTGCTGCGCGCCGGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTCAGCGCGGCAGCTCGGGCCAGAGCAGGCTCTCGGCGCTGGCGCAGGCGCCGAACAGCGGTTTGCTGAACAGGTAGCCCTGCATCAGCTCGATGCCCTG ATCGGCCAGGCACAGGCATTCGTCGAGGGTTTCGATGCCCTCGGCGATCAGGCGGATGTCCAGTTCGCGGCAGATTTCCGTCACGCCACGCACGATGGCC TGCCGCGAGTGGCTGGCGTCGATGCCGCGAATCAGGTCCATGTCCAGCTTGATCAGGTCGGGCTGGAAGTCGGCCAGCAGGTTGAGCCCAGCGAAGCCGG CGCCGAAATCGTCGATGGCGGTCATGAAGCCGATGCGCTGGTATTCGCGCAGCACCTCGGCCAGCCACTTGCCGTCGTTGATCTCCTCGCCTTCCACCGT CTCGAAGATGATCCGCTCGATGGGAAAGCCGTACTGCTGCGCCGCCTCCAGCGTGGAGCGGATGCACAGCTCCGGGCGGTAGATGGCGTTGGGCATGAAG
Amino Acid Sequence
>dimethylallyltransferase
MKVLIVLTSHDRLGDTGKPTGFWLEEFAAPYFVLRDAGAAITLASPNGGQPPLDPKSDEAEAQTDATRRFKADAEAQRALASTVPLAQVSAADFDALFFP GGHGPLWDLVRDRHAIELIETFARSGKPVAAVCHAPAVLTEVRGADGEFLIKGRGVTGFTNGEEAAVELTEVVPFLLEDRLKARGGNYSKGPDWAPYVVV DGQLVTGQNPASSEAAATALLELLRAG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site