Pseudomonas sp. HMP271, DP64_RS00320
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. HMP271 Pseudomonas_HMP271_contig_1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACCTGGTCCAGCGGCAGCTTGGCATCGAGCACCACCATCGCGGTCATCAGCTTGGTCACCGAGGCGATCGGCACCACCAGGTCGGGATTGCTCGAATAGA GCACTTCACTGGTCCGCAGGTCGACCAGCAGGGCGCTGCCGGATGCCAGTTCCTGCTGGCCCTTGGGCGCGGCGCAGGCCAGCGTGGCCAGCACGATACC GCCGCATCCCAGCAGCAGCCCCAGGAACGATTGACGTAGCTTCACGGATTTCACCCACAGAAAGGTTCGGAAACGGGACGCGCCGCAACGACAGACGCGG CGCGCAGTATATGCGCGCCCCAGGCGGACCGCAGCTTTCGCGTGCGATGCACCGAGGCGCCACGCCGAGGCCGCAAGCATCGACTACGCTGAGCGTAGCG CGGCCAGCTCAATCGCGCCGCCCCGTCCCCGGGCGGAGTGGCACCTTTGGTAGGGCGCAGAGTCCAAATTGGCTCACATCGATTGCAGGGGAGGCCTCAC
|
|
| DNA Sequence for Gene |
>DP64_RS00320
ATGTCGCGATTCAGCCACACACCCACCACGCGTGCCGAAGTCCAGCACGAGATCGATACCCTCATGCGCGCCCTGGACGAACTCAGGCACGACGCCACGC GCGGTTCTCGCCACGGTCTGCAGGATCTGCGCTCGCGTGCCGAAGCGCTCTGGCACGACGCTCACTGGGACGAACACTGCGCCGACCTGTCGCGGCGGAC CCGCGATGCCGGCCGCATGGCCAAGGACTGCGCCCGCGCGCATCCGTGGACCACGGTGGCGCTGGCCGCCGGTGCCTGCGCGTTGATCGGCTATCTGGTC ACACGTCGCTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
AGGACGGCCGCCATGCTCAACGCCGAAACGCCGCGCCTGAAGTTCGCGCTCTACGGAGCGCATTCCAGCTTGGGCAGTGCCGTGCTCTGCGAACTGCTGA GCCGGCAGCATGAAGCCGTGGCCCTGCTCAACGACTGCAACTCGATCACCGCGCGTCCCGGGCTGCGCACCAAGCCCGGCGACCTGTTCGATGTCGCCAG TGTGGCGCGCAGCGTGGCCGGCATGGACGGCGTGATCTGCCTGTTCGACAGCCCGTCGGTGCCCAGCGCCCCGGACGCCGCCATCGTCGGCCAGCCGCAG GACCTCTACCAGGCGGTGTACACGCTGCTCAACGGCATGACCGAAGCCGGTGTCGAGCGCCTGATGCTGGTGGCCGACTTCGCGGCGCATGCCGAGGAAT CGGAACTGGAAGCCGCGCTGAAACTGATCGCCTCACACCCGCTGAAATGGACGCTGGTGGATGCCAGCACGGCGGGCGAGGAGCTGTCCATTGATGATCT
|
|
| Amino Acid Sequence |
>hypothetical protein
MSRFSHTPTTRAEVQHEIDTLMRALDELRHDATRGSRHGLQDLRSRAEALWHDAHWDEHCADLSRRTRDAGRMAKDCARAHPWTTVALAAGACALIGYLV TRR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|