Pseudomonas sp. FGI182, C163_RS25645
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. FGI182, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GACGCCTTTGCCCGCTTCGACGCCGACCTGGCGCTGTCGGTGGCCCAGTACGACAAGACCATCGACCGTGAATACAAGACCGCCCTGCGTGAGCTGGTGA CCTACATGATGGAAGACCCGCGCTCGATCTCGCGGGTACTGAGCGTTATCTGGGTCCTGCGTTCGCTGGAGCGTATCGGCGACCATGCGCGCAACATCTC CGAGCTGGTGATCTACCTGGTGCGCGGCACCGACGTGCGTCACATGGGCCTCAAGCGCATGACGGCAGAAGTGCAGGGCACTGCTGTTTCCGACGGCGAA AACGCTAATGTTCCGGCCGAACCTGACGATAAGTAAGGTTGCTCCCGAGCATCGACGCCCGGCCTTGGCCGGGCGTTTTCGTTTGCGGTCGAGGAGCCGG CAGGCACCCGCGAACGATGTGAAGAAGTCCCGGCGTGACCAGGTTGTAGCAAGTGGCCATTATTCGGCGGTAGGCTAGTCGGGATTCAGAAGGAGTATCG
|
|
| DNA Sequence for Gene |
>C163_RS25645
ATGAGTAAAGTGAATGTGCTGGTCGTGGATGACGCCCCGTTTATCCGTGACCTGGTCCGCAAATGCCTGCGCAATGCCTTCCCGGGCATGACCATCGACG ACGCCGTCAACGGTCGCAAGGCGATGGCCATGCTGGGCAAGGAAGCGTTCGACCTGGTTCTGTGCGACTGGGAGATGCCGGAAATGTCCGGTCTGGAACT GCTCACCTGGTGCCGCCAGCAGCCTGAGTTGAAGAACCTGCAGTTCATCATGGTGACCAGCCGTGGCGACAAGGAAAACGTCATCCAGGCGATTCAGGCG GGCGTTTCCGATTTTGTCGGCAAGCCGTTCACCAACGAACAATTGCTGACCAAGGTGAAAAAGGCCCTGACCAAGATCGGCAAGCTCGACAGCCTGATGG CCAGCGGCCCGGCACGGGTCAACTCGGCGTTCGCCAATGACTCGCTGAATGCACTGACAGCCGGCAAGCCTGAAGCGGTGAAGGTCACGGCGCCAGCGCC GGCACCTGCACTCGCCAGGCCAGTGGCCAATGCCCCCCGGCCCGCCGCTCCTGCGCCGACCGGCCGTGGCCAGGGCCAGTTGCGCCTGGCCGGCGGCATG CAGCCATGCGTGATCAAGGCGCTGAGCCTGAAAGAGGCCCTGCTGGTGGTGCGCCGTGGCGAAGCGCTGCCTCAAGTGCTGGAAGGCGCAGTGCTGGACC TGGAGCAGGGCGAGAACGCCGAAGTCGCGCGCCTTAACGGCTACCTGCATGCCGTCGCGGCACTGGAACCCAAGCCTGACAGTGACTGGTTGCAACTGAC CTTCAAGTTCGTCGACCAGGATGCCCAGAAGCTCGACTACCTGTCGCGGCTGATTGCCCGCGGGACGGCGCAGAAGCATTTCACCCCGGGCGCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCGCAGCCTCACACCGCACTTTTTGTAGGAGCAGCCTTGTGCTGCGAATGGCTGCGGAGCAGCCCCCAGGCATCAATGCCGCCGCAAGCATTGCCGGGGC TGCTTTGCAGCCCATTCGCAGCACAAGGCTGCTCCTACAAAAAACTGCGCACCCCAGGGCCATCCGACCAACTGTCATACCCGCCGCAAAACCCCCTGCT AGGCTTCGACAAATCATAACTGTCAAAAAGCCACTATCATGCCCGCCCGCCTGCTGCTGTTCTGTGCATTGCTCATGGCCTCGGCGTCGAGCCTGGGCAT GACTATCTACGAGATCACCGATGATGGCCGCGTGACCTCCTATTCCGACCGGCCCGGCCCCGGTGCCAAAACCTTTGTGCGGCGCGTACCTATGGTTGAG GTGCCCGAAGGCCAGGTTCTGCTGAACGCGATAACCTTCAACGGCGGCGTGAGCTTTTCGGCCCGCAACCAGCTACACGTGCCAGTGGAGGTGGAGTTGC
|
|
| Amino Acid Sequence |
>chemotaxis protein CheY
MSKVNVLVVDDAPFIRDLVRKCLRNAFPGMTIDDAVNGRKAMAMLGKEAFDLVLCDWEMPEMSGLELLTWCRQQPELKNLQFIMVTSRGDKENVIQAIQA GVSDFVGKPFTNEQLLTKVKKALTKIGKLDSLMASGPARVNSAFANDSLNALTAGKPEAVKVTAPAPAPALARPVANAPRPAAPAPTGRGQGQLRLAGGM QPCVIKALSLKEALLVVRRGEALPQVLEGAVLDLEQGENAEVARLNGYLHAVAALEPKPDSDWLQLTFKFVDQDAQKLDYLSRLIARGTAQKHFTPGA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|