Strain | Pseudomonas sp. FGI182, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CGGCCACCGTGGAGTCGGCCAGCACGGCGTTGGCCTGGGCCAGCACCCACTCGCGGTCGAGCACGCGGAAGTCGGAAACGTTGACGGTATCCTGCACGGT CAGGGCGGTCACTGCGGGTGCGGCGTGACAGCCTTGGGCGATCAGGGCTTCGATATCTGCCTGCAGGCCGGCGCCGCCACTGGGGTCGTGGCCGGAGAGA CAGAGGACAACGGGGCGGGAGCTGTAGGTATTCATGGTCGGCGAGCTTACCACCAATCCTGTTTGGGCGGATCGTCCTACAAACGAGTTTTGTTGATCAT AAGGTCAGTTTTTTGCCGGTTTAATTTCTGAAAGCATTGATTTAGAGCCTTTTCTTTGTGATTGGATATGGTCGATTGCCAGGTTGCGAAGCTATGCTAG AGTGCTCGGATAACTCTACAAACGGGTTCTGCCGGATCGTGTCGTCTCAAACGGATGGGAGGCAACCGCGACTCGACCGGACAGGCCATGCTGGGGCTGT
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DNA Sequence for Gene |
>C163_RS22910
ATGCGCTATTTGCTGATTGTGCTTCTGGGCTTGCTGCCCGTGCTGGCCGGGGCAGTCGATTTCGACGACGCTACGCGGCATCTTCCGCTGGGCAAGGCCA TGCAGGTTTATGAAGACCTCGATGGCAGCGCCAGCATCGCCCAGGTCAGTGCCCCTGGGTTCGCCAAGCATTTTCGCCCCCACCATGAAGACGTGCTGAA CGCCGGTTACTCCACCTCGGTGTTCTGGCTCAAGGTCGAACTGCGCCCTGTCGCCGCGCCCGGCGCCGCCCCACGGCAATGGCTACTGGAACTGGCCTAT CCGCCGCTGGACCACCTCGAGCTGTACCTGCCCGACAGCAGTGGCAGTTACCGCCTGGCCCGGCGCACCGGCGACGCCTTGCCCTACCAAAGCCGGCAGA TCCTGCAGAACAACTACCTGTTCGAACTGCAGCTGCCGCCTGGCCAGGTGACCACTGCCTACCTGCGCCTGCACAGCCAGGGTTCGGTGCAGGCGCCGCT GGCGCTGTGGTCCGCCCAGGCCTACATGGAGGAGCAGCCCACGCGCCTGTATGTGCTGGGGATGATCTACGGCGTGCTGCTGGTGATGCTGGTGTACAAC CTGTTCATCTACCTCAGCGTGCGCGACGTCAGCTACCTCTACTACATCCTCTATATCGCCTCGTTCGGCTTTTACCAGGTGTCGGTGAATGGCGCCGGTG TGGCCTACTTCTGGCCGGACAGCCCGTGGTGGGCGAATGCTTCGACGCCGTTGTTCATCGGGGCCGCTGGCCTGTTCGGCTGCCAGTTCGCCCGGCATTT CCTGCAACTGGGCAGCATCAGCCGTGGTTTCGACCGGCTGCTGCAGCTGCTGATGCTGGGTGGCGCGCTGGTCATGGTGCTGGCGGTGAGCATGCCCTAC GGCGTCGCCCTGCGCATGGCCACGGTGCTGGCGTTGCTGTTTACCGTGAGCATCTTCGCTGCCGGGCTGTACGCCTGGTGGCGTGGCTTGCGCGTGGCAC GCTGGTTCATCATCGCCTGGACGGCATTCCTGCTTGGTGGCCTGGTCAACACCCTGATGGTGCTGGGCTACCTGCCGAACGTGTTCATCACCATGTATGC CAGCCAGCTGGGGTCGGCGCTGGAGGTGGCCTTGCTGTCGCTGGCGCTGGCCGACCGCATCAACAGCCTGCGCGAGCAGCAGGCGCAGACCTTGCGAGAC ACCGGGCGCACGCTGGAACAACTGAACCTGCAACTGGCCAGGAGCAACCGGCTGAAAGATGAGTTCCTGGCCAGCGTGACCCATGAGCTGCGCACACCGA TGAATGGTGTGATCGGCTCGCTGGAGCTGATGCATACCCTGCCGATGGAGGCCGAGATGGCACAGTACCACCGCACGGCGGTGGGCTCGGCCCAGGGCAT GATGGATATGGTCGATGCCATTCTTACCCTGTCCGAGCTGCAGGCCGGCCGCCTGCGCGCGCAGCCGGCGCCGTTCAGCCTGCGTGACCTGCTGCAGGGC GTGCGTGCCGGTTATGCCGGGCAGGCTTTGGGCAAAGGCTTGTACCTGAGCCTGGACATCCCGGCCGATGTGCCGGACGGGTTGCTGGGCGATGCTCAGA AGCTGGCCCGCTGCCTGGGGTGCCTGGTGGACAACGGTTTGAAGTTCACCCACCAGGGCGGGGTGATGATCCAGGTGCGCGGGCGCCGGGTGGGGCCTGA CGACCTGGCGCTGACCTTCATGGTCAGCGACAGCGGTATCGGCTTCGATGACCTCGATCAGGCGACCCTGTACCAGCGCTTCTTCCAGGTCGATGGCTCG ATGACCCGGCGTTATGGCGGGCTGGGGATTGGTTTGTCGATCTGCCGGCAGATGGGGGAATTGTTGGGGGCACGGTTGTCGCATGAGTCGACGCGGGGGT TGGGGAGCCGGTTCGAGTTGAGTTTGAACATGGCTATTGCGCAGGTGCAGATGGCATCGAATGTTCTGCAGACGCGACGGTTGCTTTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AGATTTTCGCAGGCTTTGTTGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCTACAGGTTTGGTGCTCAGCCCAGATAAATGCGCGATCCCCTT GTGGGAGCGGGCGTGCCTGCGAAGGGCCGCAAAGCGGCCCCAAGAAACCCACAGGCTACAACAACTCCAGACTCTTCCTACGCACTGGCACTGGAAACTG CGCCAACTGCGAAATACCCTACAACCCCTGTCGACACGCGTCTGATTGTTCCTGCAAATCCCGCGCTCTAGGCTTTTCCAGTCGCTGACGGTTCAGCGAT CGGGTGTGGAAACCTGGCAAGACCTATGGTGCGTGTCGTTACGACAGCTGTACGCGGGAGGCCTTTGGGCCTACCGGGTTCGCACCATGCCTGGTTTTCC ACCCCGTGTGCAGCTGTCACCCCTATGTGTGGAAACGGACGGGTGGCACATATCTCCATGGTGCCGAACTCATGAACGACGAAACCAAAACCACCCCTGG
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Amino Acid Sequence |
>histidine kinase
MRYLLIVLLGLLPVLAGAVDFDDATRHLPLGKAMQVYEDLDGSASIAQVSAPGFAKHFRPHHEDVLNAGYSTSVFWLKVELRPVAAPGAAPRQWLLELAY PPLDHLELYLPDSSGSYRLARRTGDALPYQSRQILQNNYLFELQLPPGQVTTAYLRLHSQGSVQAPLALWSAQAYMEEQPTRLYVLGMIYGVLLVMLVYN LFIYLSVRDVSYLYYILYIASFGFYQVSVNGAGVAYFWPDSPWWANASTPLFIGAAGLFGCQFARHFLQLGSISRGFDRLLQLLMLGGALVMVLAVSMPY GVALRMATVLALLFTVSIFAAGLYAWWRGLRVARWFIIAWTAFLLGGLVNTLMVLGYLPNVFITMYASQLGSALEVALLSLALADRINSLREQQAQTLRD TGRTLEQLNLQLARSNRLKDEFLASVTHELRTPMNGVIGSLELMHTLPMEAEMAQYHRTAVGSAQGMMDMVDAILTLSELQAGRLRAQPAPFSLRDLLQG VRAGYAGQALGKGLYLSLDIPADVPDGLLGDAQKLARCLGCLVDNGLKFTHQGGVMIQVRGRRVGPDDLALTFMVSDSGIGFDDLDQATLYQRFFQVDGS MTRRYGGLGIGLSICRQMGELLGARLSHESTRGLGSRFELSLNMAIAQVQMASNVLQTRRLL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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