Pseudomonas sp. FGI182, C163_RS22410

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. FGI182, complete genome. [Details]
DNA Sequence Upstream of Gene
GGCATCGTCATCGACCGCCGCCTGCCGGTGCTGCTTACCCCTTGAACCAGATGCCCTGGCTGTCCTCGTGGCAGCCTAGGGCCTGCAGTTGCTCGCCCTC GCACGGCCCGGCCACGCATTCGCCGCTTTCGATCAGGAACAGCGCGCCATGATGGGCGCAGTGAATCAGGCTGGCGCTGTCATCGAGAAACGCATCTTCC GCCCAGTTCAGCGGGATGCTGCGGTGCGGGCAACGATTGCGGTAGAGGTACACCTGGCCCTGGCGGCGTACGCCGAACAGTTCGATGCCGTCTACGCTGA AGGCGCGGCTTTGGCCTTCGGCCAGGCCGTGGGAGGTACAAAGGAAGTGCATGGCAAGGATGACTCGTGAAACAAGTGGTAGCTTGACGCGTCAATGCGA ATAATTATCAAATTGCCCGCATTCGCTGCGCCCGGCTGCTTATGGTGCGCAGTTCCGTCGCCCGCCACAAGGCGCGCGGCCCGCCTGCAGAAGGAACCCG
DNA Sequence for Gene
>C163_RS22410
ATGATGCGCCGTCCCGTCGCCTTGCTCGCCCTGTGCGCGAGCCTTGTGCTCTCCACCCAGGCCCCGGCGGCCGAGCTGCCGCAGCGTTGGGTCAGCGCAG GTGGTGCACTAAGCGAATGGATCAGCGCGCTGGGTGGTGAAGCGCGGTTGGTGGGTGTGGACACCACCAGCCAGCATCCGCCATCGCTGAAGTCACTGCC TAGTGTCGGCTACCAGCGGCAGCTGTCTGCGGAAGGCATTCTCAGCCTGCGCCCGGATGTGCTGGTGGGCACCGACGAAATGGGGCCGCCACCGGTACTG GCGCAAATCCGCAAGGCTGGCGTGCGGGTCGAACTGTTCTCCAGCAAGGCCGAACTGGCGGCGGTGGATGAAAACCTCAAGCACCTGGGGCAGTTGCTGG GCGCAGAACAGCAGGCCGCGGTCCTGGCATCGGGCTACCACCAGCAGCTCGATGCCTTGCAGGCCAAGGTCAGGCAGGCCCGGGCGGAGCAGAAGGCACC AGGGGTGTTACTGCTGGTCGGGCATGCCGGGGCCAAGCCGCTGATCGCCGGGCAGGGTACTGCCGGTGACTGGCTGCTGAGCCAGGCAGGTGGGCGCAAC CTGGCAGAACATCAGGGCTACAAGAATTTCTCCAGCGAAGCACTGGCGGCGCTGGACCCGGATGTGATCGTGTTTTCCGACCGGGCGCTGGCCGATGAGC GGGCCTTGCAGGCGTTGCTGAAAGAAAACCCCGCGCTGGCGGCCTCGCGCGCCGTGCGCGAGAAACGCCTGGTATCGCTTGACCCGACGCTGTTGGTCGG TGGGCTCGGGCCACGCCTGCCGGCAACACTGCAGTTGCTTGCGGCCACCTTCTATCCGGCTGCCAAGGCCGGCCTCGCCCAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AACAGCGGGTCCAGCCACGCACGCTGTTCGTTTGCCTGAGCCTGTTGTGCCTATTGGCGGTGTGGTTGTCATTGGCCCTGGGGCCGGTCAGCCTGCCGCT GTTCGATACCCTGCGTGCCGGCCTGCGCCTGCTGGGGCTGCCCATTGCCGCCGACGGCCTGCAGCAGGCCGAGATGATCCTCGGCCAGATCCGCCTGCCG CGCACCTTGCTGGGGTTGGCGGTGGGCGCGGTGCTGGCGCTGTCCGGTGTGGCGATGCAGGGGCTGTTCCGTAACCCACTGGCCGACCCTGGGCTGGTAG GGGTTGCCGCCGGGGCGGCGGTGGGCGCGGCGGTGGCCATCGTTGGCGGCAGTTGGCTGGGCGGCATGCCGGATGTGCTTGCCCCTTACTTGTTGTCGCT GTGTGCTTTCATCGGTGGGCTGGGCGTGACTGCGCTGGTCTATCGTCTGGGGCGGCGCGACGGCCAGACCAACGTCGCCACGATGCTGCTGGCTGGTGTG
Amino Acid Sequence
>ABC transporter substrate-binding protein
MMRRPVALLALCASLVLSTQAPAAELPQRWVSAGGALSEWISALGGEARLVGVDTTSQHPPSLKSLPSVGYQRQLSAEGILSLRPDVLVGTDEMGPPPVL AQIRKAGVRVELFSSKAELAAVDENLKHLGQLLGAEQQAAVLASGYHQQLDALQAKVRQARAEQKAPGVLLLVGHAGAKPLIAGQGTAGDWLLSQAGGRN LAEHQGYKNFSSEALAALDPDVIVFSDRALADERALQALLKENPALAASRAVREKRLVSLDPTLLVGGLGPRLPATLQLLAATFYPAAKAGLAQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site