Pseudomonas sp. FGI182, C163_RS21120
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. FGI182, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GACGTCGGCTTCCTTGGCGCCGCCCAGGTCGACCGCTTCGGCAACATCAACACGACTGTGGTCGGTGACTATCACGCCCCGAAAACCCGCCTGCCGGGTG CCGGTGGCGCACCGGAAATCGCCGGTTCCGCCAAGCAGGTGCTGATCATCCTCAAGCAGTCGCCGCGTGCCTTCGTCGACAAGCTGGACTTCATCACCTC GGTTGGCCACGGTGAAGGCGGCGACTCGCGTAAACGCCTTGGCCTGCCAGGCGACGGCCCGGTCGGCATCATCACCGACCTGTGCATCATGGAGCCGGAA GCCGGCACCCACGAATTCGTCGTCACCGCGATCCACCCGGGTGTGACCCGCGAGCAGATCATCGCCGCCACTGGCTGGGCGATCCGCTTTGCCGACGATG TGCAGACCACTGCCGAACCTACCGAAGTCGAGCTGTCCGCCCTGCGTGACCTCGAAGCCCGTACCGCCGCGGCCCATGGCCAGGTGGCAGGAGAAGCCTG
|
|
| DNA Sequence for Gene |
>C163_RS21120
ATGCGCGACGTATTCATCTGTGACGCCATCCGTACCCCGATCGGCCGCTTCGGCGGCGCCCTGGCCGGCGTGCGGGCCGACGACCTGGCCGCCGTGCCGC TGAAGGCGCTGATCGAGCGCAACCCGAGCGTGCAGTGGGATCAGGTTGACGAAGTGTTCTTCGGCTGCGCCAACCAGGCCGGTGAAGACAACCGCAACGT GGCGCGCATGGCGCTGTTGCTGGCCGGCCTGCCGCAGAGCATCCCGGGCGTTACCCTGAACCGCCTGTGCGCGTCGGGCATGGATGCCATCGGCACTGCC TTCCGCGCCATTGCCAGCGGCGAAATGGAGCTGGCGATTGCCGGTGGCGTCGAGTCGATGTCGCGTGCCCCGTTCGTCATGGGCAAGGCCGAAAGCGGCT ATTCGCGCAACATGAAGCTCGAAGATACGACCATCGGCTGGCGTTTCATCAACCCACTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGC CGACAACGTGGCCGACGATTACCAGGTTTCGCGTGCTGACCAGGACGCCTTCGCCCTGCGCAGCCAGCAGAAGGCAGCTGCCGCCCAGGCCGCCGGTTTC TTCGCCGAAGAAATCGTGCCGGTGCGTATCGCGCACAAGAAGGGCGAGACCATCGTCGAGCATGACGAGCACCTGCGCCCGGAAACCACACTGGAAGCCC TGACCAAGCTCAAGCCGGTCAACGGCCCGGACAAGACCGTCACCGCCGGCAACGCCTCGGGCGTGAACGACGGTGCCGCGGCGTTGATCCTGGCCTCGGC CGAGGCGGTGAAGAAACACGGCCTGACCCCACGTGCCCGGGTACTGGGCATGGCCAGTGCCGGTGTTGCACCGCGGGTGATGGGCATTGGCCCGGTGCCG GCAGTGCGCAAGCTGACCGAGCGCCTGGGTGTGGCGGTGAATGATTTCGATGTGATCGAGCTCAACGAAGCCTTTGCCAGCCAAGGTCTGGCGGTGCTGC GTGAGCTGGGTGTGGCCGACGATGCACCGCAGGTGAACCCCAACGGCGGTGCCATCGCCCTGGGCCACCCGCTGGGCATGAGCGGTGCGCGCCTGGTGCT GACTGCGCTTCACCAGCTGGAGAAGAGCGGTGGGCGTAAAGGTCTGGCGACCATGTGTGTGGGCGTAGGCCAAGGTTTGGCGCTGGCCATCGAGCGGGTT TGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCCACAGGGAACCACGCATCCCCTGTGGGAGCGGGTTTACCCGCGAAGAGGCCGGCACATGCGACTCA AGGCTAATTGCCAGCCAGATAGCGGAACGAGTGTGTTACCAGGTGTGTCTAGAATTACCTGCGACCCTCCAGGAGTAAACTCACCATGACCTCAGCCTAT TACACCGGCGAAGAACGCAGTAAACGCATCTTCGCTATCGTTGGTGCCTCTTCAGGCAACCTGGTGGAATGGTTCGACTTCTACGTCTATGCCTTCTGCG CGATCTACTTTGCCCCGGCTTTCTTCCCCTCCGACGACCCCACCGTGCAGTTGTTGAACACGGCAGGCGTGTTCGCCGCGGGCTTTCTGATGCGCCCCAT AGGTGGCTGGATCTTCGGCCGCCTCGCTGACCGCCATGGTCGCAAGAATTCCCTGATGATCTCGGTGCTGATGATGTGCTTCGGCTCCCTGATGATCGCC
|
|
| Amino Acid Sequence |
>beta-ketoadipyl CoA thiolase
MRDVFICDAIRTPIGRFGGALAGVRADDLAAVPLKALIERNPSVQWDQVDEVFFGCANQAGEDNRNVARMALLLAGLPQSIPGVTLNRLCASGMDAIGTA FRAIASGEMELAIAGGVESMSRAPFVMGKAESGYSRNMKLEDTTIGWRFINPLMKSQYGVDSMPETADNVADDYQVSRADQDAFALRSQQKAAAAQAAGF FAEEIVPVRIAHKKGETIVEHDEHLRPETTLEALTKLKPVNGPDKTVTAGNASGVNDGAAALILASAEAVKKHGLTPRARVLGMASAGVAPRVMGIGPVP AVRKLTERLGVAVNDFDVIELNEAFASQGLAVLRELGVADDAPQVNPNGGAIALGHPLGMSGARLVLTALHQLEKSGGRKGLATMCVGVGQGLALAIERV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|