Strain | Pseudomonas sp. FGI182, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GGGCTGGAGCTGATCACGCGCCTGCGCAGCCAGGACAAGACCTTCCCCATTCTCATCCTTACCGCCCGCGGCAACTGGCAGGACAAGGTCGAGGGCCTGG CCGCCGGTGCCGACGACTACCTGGTCAAGCCGTTCCAGTTCGAAGAACTCGAGGCACGCCTGAACGCCCTGCTGCGCCGCTCCAGCGGCTTCACACAGTC GACCATTGCCGCCGGCCCGCTGGTGCTCGACCTCAACCGCAAGCAGGCGACGCTGGACGAGCAGCCCCTGGCCCTGACCGCTTACGAATACCGCATCCTC GAATACCTCATGCGCCATCACCAGCAGGTGGTGGCCAAGGACCGCCTGATGGAGCAGCTGTACCCGGGTGACGAGGAACGCGACCCCAATGTCATCGAAG TGCTGGTCGGCCGCCTGCGGCGCAAGCTCGAGGGCGAGCACGGCTTCAAACCGATCGACACCGTGCGCGGCCTGGGCTACCTGTTCACCGAGCGCTGCCG
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DNA Sequence for Gene |
>C163_RS19850
ATGATCCGTTCGCTGCGGGTGCGCCTGATGCTGGCGGCCGCGGTGCTGGCGCTGCTGTTCATGCTGGCGCTGCTGCCGGCCTTGCAGAAGGCCTTCAGCC TGGCCCTGCAGGAGTCGATCGAACAACGCCTGGCCTCGGATGTGACCACGCTGATTTCCGCTGCGCGCATCGAGCACGGCCAACTGCAGATGCCTACGCT GCTGCCGGACGAGCGTTACAACCTGCCGTACACCGGCCTGCTCGGCTATATCTTCGACCGCGACGGCAAGCTGGTCTGGCAGTCGCGGGCAACCGCCGCG CAGAACGTCAACTACCGCCCGCGCTACGACGGCCGAGGCAACGAATTCGCCCGCATTCGCCAGGCCAATGGCGAAGAGTTCTTCGTCTATGACGTCGAGA TCAAGCTGCTGGGTGGCCAGAGCGCCGCCTACAGCATCGTTGCCCTGCAACCGGTGCGCGAATACCAGCACACCCTCGATGGCCTGCGCGAAAAGCTCTA CCTGGGTTTTGGCGCGGCCTTGCTGGCGCTGCTGGTGCTGCTGTGGGCCGGCCTGACCTGGGGCCTGCGTTCGTTGCGCCGGCTCAGCCGCGAGCTGGAC GATGTGGAGTCGGGCGTGCGGGATGGCCTGAGCCGCGAACACCCACGGGAGCTGCTGCGCCTGACCGGCTCGCTGAACCGCCTGTTGCGCAGCGAGCGCG AGCAGCGTCAGCGCTACCGTGATTCGCTCGATGACCTGGCGCACAGCCTGAAGACGCCGCTGGCGGTGTTGCAGGGGGTGGGCGAAAGCCTGCAGCAGCG TAGCGGCGAGCGCGAGCAGGCGCGCGTGCTGCAGAGCCAGATCGAGCGCATGAGCCAGCAGATCGACTACCAGCTGCAACGCGCCAGCCTGCGCAAGAGC GGCCTGGTACGCCACAGCGTGTTGCTGCGGCCGTTGCTCGAAAGCCTGTGCAGCACCTTGGCCAAGGTGTACCGGGACAAGCGGGTGGATGTGACGCTGC AACTGCCCGATGCGGCGCAGGTGCCGATGGAGCAGGGCGCGTTGCTGGAGCTGCTGGGCAACCTGCTGGAGAACGCCTACCGCCTGAGCCTGGGCCAGGT GCGCGTGAGCCTGGAGCAGGCGCCTGGGCAGTTGACCTTGTGCATCGAGGACGACGGGCCGGGGGTGCCGGCGGACCAGCGCGAGCGGATTCTGGAGCGT GGGGAGCGGCTGGACAGCCAGCACCCGGGGCAGGGGATCGGGCTGGCGGTGGTCAAGGATATCGTCGACAGCTATGACGCCGAGCTGAGCCTGGGGGATT CTCCTCTGGGGGGCGCGGCGTTCAGGGTTACCTTCAACCTCGAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TTTACTGGGTTGGCCGGCCTCTTCGCGGGTAAACCCGCTCCCACAGGGGGCGCACTGCACTCGAGCCCTGTGCAGTACCTGTGGGAGCGGGTTTACCCGC GAAGAGGCCGGCACAGGCAAACCACAATGGGCGGATTCCCGCCAATGCCCCTGTACAAATCCCGCCACCGGGCGGAAATCCGCCAGCCTTCCTCAGGCAA ACCGCCCCGTCGTTGGGCGTTTATCCCTCGCAAATACAGCCTTTGCACCTTTGATGGGCATTTTGGCACCACCCTTGCTATTGATCCTCGCAGAGGCCTG CCCAGGCAGCTCGAACACAACGACAAATCCCTCCAGGTGCAGGAGGGTTAGCGATTCAGGTGCCCCATCGCCCTGGGAAGGGTGAACCGGCACACTTGAG GAAAATTAGCCATGACGACACGTCAGCCGCTGTACAAATCCCTGTATGTCCAGGTGTTGGTCGCCATCACCATCGGCATCCTGCTCGGCCACTACTACCC
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Amino Acid Sequence |
>histidine kinase
MIRSLRVRLMLAAAVLALLFMLALLPALQKAFSLALQESIEQRLASDVTTLISAARIEHGQLQMPTLLPDERYNLPYTGLLGYIFDRDGKLVWQSRATAA QNVNYRPRYDGRGNEFARIRQANGEEFFVYDVEIKLLGGQSAAYSIVALQPVREYQHTLDGLREKLYLGFGAALLALLVLLWAGLTWGLRSLRRLSRELD DVESGVRDGLSREHPRELLRLTGSLNRLLRSEREQRQRYRDSLDDLAHSLKTPLAVLQGVGESLQQRSGEREQARVLQSQIERMSQQIDYQLQRASLRKS GLVRHSVLLRPLLESLCSTLAKVYRDKRVDVTLQLPDAAQVPMEQGALLELLGNLLENAYRLSLGQVRVSLEQAPGQLTLCIEDDGPGVPADQRERILER GERLDSQHPGQGIGLAVVKDIVDSYDAELSLGDSPLGGAAFRVTFNLE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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