Strain | Pseudomonas sp. FGI182, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GACCTGCAACAACTGCTGCGCCTGGCTGCCGCTGCCGTATCGCGCCTGCAAAGCCACGCCATGAGCAGCCTGCAACAAACCGGTACCCTGGAAAACGGCA ACCTGCAGACCACCTGGCAAACCGAAGTGCCGATCCGTCACGGCCAGGAGTTCATCCCGTTGCAGGTCAAGCTGCAACGCGAGGAAACGCCACAACAGCA GGCCGACCGCCAGCAGGAGTCAGCCGACCCGCTGCAAGCCCTGTGGCGTATCGAGCTGGCTTTCGACCTCTCGCCCCTTGGCCCGGTGCAGGTCCAGGCA CAACTGAGCCAAGGCCGCCTGGGTGGCCAGCTTTGGGCGGAACGCGAGGCGACAGCCCGGCTGATCGACAGCCAGCTCGGTAGCTTGCGCGAACGCCTGT TGGCGCGGGGCCTGGATGTGGGTGATCTGGAATGCCATCCTGGTATCCCGCCACAAGGCCCGCGTACGCGGGTAGAACAACGTTGGGTGGATGAGAACGC
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DNA Sequence for Gene |
>C163_RS18245
ATGACGAACCAACCTGCACGGCAGGCGATTGCCCTGTTCTACGACGGGCAGCAAGCCCCTACCCTCACCGCCAAGGGCGACGATGCGCTGGCCGAGGCCA TCCTAGCTCTGGCCCGCGAGCACGAAGTGCCGATCTACGAAAATGCCGAGCTGGTGCGTCTGCTGGCGCGCCTGGAGCTGGGGGACCAGATACCGGAGGC GCTGTACCTGACCATTGCCGAAATCATCGCCTTTGCCTGGCACCTGCGGGGCAAAGTGCCTGCGGGCTTCGATGACGAGCCTGCCGCCCCAGGGACAACC CCACCCCTGCTAGGAAGGCTGCTGCCCGGAGGCGAAGGCGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCGCCATGGTATCCATGCAAATTGCCTTTTTGCGCCATATTGGTAACGTGCCGTTCAAGGTCAGGCGCTTGGCGATGTAAGGAATACTGTAATGCGTACC ATCTGGTTCTTGCTGCTCCCGGGCACCCACATCCTTGATCTCGGTGGCCCGTTACAAATTATGGCGAGCCTCGAAGAACTCCAGCTGGCACCGGTGAACG TACGTTGCATAGCCGCCAGACAACAGGTCACCAGTTTCCAGGGCGTGACACTGAGTGGCCTGCACCAGTTGCCTGAGCGGCTCGCGCCGCAGGACTTGCT CTTCGTGGTGGGCAACAAGCTCTCTGCGACACCCGCCGAAACAGCGATATTGACCGCCACCGCCCTGTGGCTGGCGAAGGTGATCAGGCAAACGCCGGAT ATAAAGCTGTGCTCCATATGCACCGGTGCGTTCCTGCTGGGCGAAGCTGGCTTGCTGGATGGCCGACAGTGCACCACGCACCACCGTTACGTCGACTTGC
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Amino Acid Sequence |
>flagellar biosynthesis protein FlhB
MTNQPARQAIALFYDGQQAPTLTAKGDDALAEAILALAREHEVPIYENAELVRLLARLELGDQIPEALYLTIAEIIAFAWHLRGKVPAGFDDEPAAPGTT PPLLGRLLPGGEGA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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