Pseudomonas sp. FGI182, C163_RS17435
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. FGI182, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GGCCGGGCAACGCTTCCTGGAAGTCTGGTCGGGCTTGCCGGTGCTGTACCTGCTGATCATCCTCGCCAGCTTCGTGCAGCCCAACTTCTGGTGGTTGCTG GGCATCATGCTGCTGTTCTCGTGGATGAGCCTGGTGGACGTGGTGCGCGCCGAGTTCCTGCGCGGGCGCAACCTGGAATACGTGCGCGCTGCTCGCGCGT TGGGGATGCGCAACGGCGCGATCATGTACCGGCACATCCTGCCGAACGCCATGATCTCGACCATGACCTTCATGCCGTTCATTCTCACCGGTGCCATCGG CACCCTCACCGCCCTGGACTTCCTCGGCTTCGGCTTGCCGCCGGGCGCACCATCGCTGGGCGAACTGGTGGCCCAGGGCAAGTCCAACCTGCAGGCCCCA TGGCTGGGCATCAGCGCCTTCGCCGTGCTGGCGCTGATGCTGAGCCTGCTGGTGTTCATCGGCGAATCCGCCCGCGATGCCTTCGACCCGAGGAAGTGAC
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| DNA Sequence for Gene |
>C163_RS17435
ATGAGTGAACAGAACCTGATCGAAGTGCGCGACCTGGCGGTGGAGTTCGTCACCGGTGACCAGGCCCACCGCGTTGTGAACGGCATCAGCTTCGACATCC GCAAGGGTGAGACGCTGGCACTCGTGGGCGAGAGTGGCTCGGGCAAATCGGTTACCGCGCACTCGCTCCTGCGCCTGCTGCCCTACCCCCTGGCCCGCCA CCCCAGCGGCAGCATCCGCTACGAGGGCAAGGACCTGCTGCAGCAGAACGAGAAGACCATGCAGCGCATTCGCGGCAACCGCATTGCGATGATCTTCCAG GAGCCGATGACCTCGCTGAACCCGTTGCACTGCATCGAGAAGCAGATCAACGAAATCCTCCTGCTGCACAAGGGCCTGACCGGCAAGGAGGCCACGGCGC GCACCCTGGAGCTGCTGGAGATGGTCGGCATTCCCGAGCCACGCAAGCGCCTGAAGGCCCTGCCCCATGAATTGTCTGGCGGGCAGCGCCAGCGGGTGAT GATCGCCATGGCCCTGGCCAACGAGCCGGAACTGCTGATTGCGGATGAGCCGACCACGGCGCTGGACGTGACCGTGCAGTTGAAGATTCTCGAACTGCTC AAGGAACTGCAGGCGCGTCTGGGCATGGCCCTGCTGCTGATCAGCCATGACCTGAACCTGGTGCGGCGCATCGCCCACCGTGTGTGCGTGATGCAGCACG GGCAGATTGTCGAGCAGGCCGAATGCGCCAGGCTGTTCAGCGCACCGCAGCACCACTACACGCAGATGCTGATCAATGCCGAGCCCAGCGGGCTGCCGGC GCACAACCCGGTGGGCGCGCCATTGCTGGAGGTGGATGACCTCAAGGTGTGGTTCCCGATCAAGAAGGGCCTGCTGCGGCGCACGGTCGACCATGTGAAG GCGGTGGACGGGATCAACTTCAGCTTGCCGCAAGGGCAGACGCTGGGGATTGTCGGCGAGTCCGGGTCGGGCAAGTCGACTTTGGGTCTGGCGATCTTGC GGCTGATCTCCAGCCAGGGCGGCATTCGCTTCCATGGGCAAGATCTGGCTGGTCTGAACCAGAAGGCCGTGCGCCCGTTACGCCGGGAAATGCAGGTGGT GTTCCAGGACCCGTTCGGCAGTCTGAGCCCACGCATGTGCGTAGAGGACATCGTCGGTGAAGGGTTGCGCATCCACCGCATCGGCACGGCGCAGGAACAG GAAGCGGCGATTATTGCGGCCCTGGAGGAAGTGGGGCTGGACCCACGCACGCGGCATCGCTATCCGCATGAGTTTTCCGGTGGGCAGCGCCAGCGCATTG CCATTGCCCGGGCGTTGGTATTGAAGCCGGCGCTGATCCTGCTGGATGAACCTACCTCGGCGCTGGACCGCACGGTGCAGCGGCAGGTGGTGGAGTTGCT GCGCAATCTGCAGCAGAAATACAACCTGACCTACCTGTTCATCAGCCATGACCTGGCGGTGGTCAAGGCGTTGAGCCACCAGTTGATGGTGATCAAGCAT GGGCATGTGGTGGAACAAGGGGATGCGCAGGCGATCTTCCATGCGCCGCAGCATCCGTATACCCGGCAGTTGCTGGAGGCGGCGTTTTTGGAAGTTGAGG CAGGTTCGCCTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTTTTGTAGAGTCCTCAAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTGTTCGTCTTGACACTTTCTGCGCCTGTGAGACCGAGCGCCGCCCGCGCG GCGCTTCGCGGGACAAGCCCGCTCCCACATTTGTTGCAACGTGGCCATGCCTGTGAAAGAGGCGTTGTCAGCCTTGGTGCAAGGTTTGAGGTAAGTGGGG CGGCAGCAGTGCCAACTCAGAAATCCAGCCAGCCCACCAAAGTTGGCCACCATGGCCTGACAGGTTCGGCACGTTGCAACAGATGTGGGAGCGGGCTTGT CCCGCGAAGCGCCGCGCGGGCGGCGCTCGATTTTCGCGCCACCACAGAAATCAAACCGGTCACCTCCCGCCCTGACGCAATCGGGCGCAGAACACCTGCC ATGTCAGATTTAACCCCTTCCCTGTAGTCCATTTCCCAAACATACTCCTGCCGCGTGTTTTCCGTTGCGGCTGCTCTGGCTGAGCTCTAGTCTCGGTTGG
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| Amino Acid Sequence |
>microcin ABC transporter ATP-binding protein
MSEQNLIEVRDLAVEFVTGDQAHRVVNGISFDIRKGETLALVGESGSGKSVTAHSLLRLLPYPLARHPSGSIRYEGKDLLQQNEKTMQRIRGNRIAMIFQ EPMTSLNPLHCIEKQINEILLLHKGLTGKEATARTLELLEMVGIPEPRKRLKALPHELSGGQRQRVMIAMALANEPELLIADEPTTALDVTVQLKILELL KELQARLGMALLLISHDLNLVRRIAHRVCVMQHGQIVEQAECARLFSAPQHHYTQMLINAEPSGLPAHNPVGAPLLEVDDLKVWFPIKKGLLRRTVDHVK AVDGINFSLPQGQTLGIVGESGSGKSTLGLAILRLISSQGGIRFHGQDLAGLNQKAVRPLRREMQVVFQDPFGSLSPRMCVEDIVGEGLRIHRIGTAQEQ EAAIIAALEEVGLDPRTRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRNLQQKYNLTYLFISHDLAVVKALSHQLMVIKH GHVVEQGDAQAIFHAPQHPYTRQLLEAAFLEVEAGSP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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