Pseudomonas sp. FGI182, C163_RS16695
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. FGI182, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCATGCACCTCGACCTGCTCGGCCAACTGCCGCCAGCTGTAGCGCAGGCCCTGATGGCGCGACACCAGGGCCTCGCCGTCGGCACAACGGGCCACGGTGG CGTCGAAGGCCTGGCCGATGGTCTGGGTCAGCAAGGCTTGGTCCTGGCGACCGCGGGTATAGCTTGGTTGACTCATGGGTGTCCCTTCTTGTGGTTGTTC TGGGCACGACTGAAGCAAGCGGGAATACTCTGGCGCAGATTTACGTTTACGTAAAGGTGATGAGTCGATTGACAGTGAGCGTATGCAGGTTTACGTTAAC GTAAAGGTGATGAACGACACCATCCCTCAGGCATGACGCCGAACCCTGTGGGAGCGGGCGTGCCCGCGAATGCGATCACTCAGGCAATGACGGTGGTCCT GCTGACGCATTCGCGGGCAAGCCCGCTCCCACAGGGTCCGGCGCCAGATCCTTGAGCCAGGGTGTTTCCCATATTTCAAGAACAAGAAGGTGCTCCCAGC
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| DNA Sequence for Gene |
>C163_RS16695
ATGCATTACCCCACCCTGAACTTCGCCCTGGGCGAAACCATCGACATGCTCCGCGACCAGGTGCGCACCTTCGTCGCCGCCGAACTGGCCCCGCGCGCCG CGCAAATCGACCACGACAACCTGTTCCCGGCCGACATGTGGCGCAAGTTCGGCGACATGGGCCTGCTGGGCATCACCGTGCCGGAAGAATACGGCGGTGC CGGCCTGGGCTACCTGGCCCACGTGGTGTCGATGGAAGAAATCAGCCGTGGCTCGGCCTCGGTGGCCCTGTCCTACGGTGCCCACTCCAATCTCTGCGTC AACCAGATCAACCGCAACGGCAGCCACGAGCAGAAGCTCAAGTACCTGCCCAAGCTGATCAGCGGCGAGCACATCGGCGCCCTGGCCATGAGCGAGCCCA ACGCCGGTTCCGACGTGGTGTCGATGAAGCTGCGCGCGGAAAAGCGCGGCGACCACTACGTGCTCAACGGCAGCAAGACCTGGATCACCAACGGCCCGGA CGCCAACACCTACGTGATCTACGCCAAGACCGACCTGGACAAGGGCGCGCACGGCATCACCGCGTTCATCGTCGAGCGTGACTGGAAAGGCTTCAGCCGC AGCAACAAGTTCGACAAGCTGGGCATGCGTGGCTCCAACACCTGCGAGCTGTTCTTCGACGGCGTCGAAGTACCGGAAGAAAACATCCTTGGCCAGCTCA ATGGTGGCGTGCGCGTGCTGATGAGCGGCCTGGACTACGAGCGCGTGGTGCTGTCCGGCGGCCCGACCGGCATCATGCAAAGCTGCATGGACCTGGTGGT TCCCTACATTCACGACCGCAAGCAGTTCGGCCAGAGCATCGGCGAGTTCCAGCTGATCCAGGGCAAGATCGCCGACATGTACACCCAGCTCAACGCCAGC CGCGCCTACCTGTATGCCGTGGCCCAGGCCTGCGACCGTGGCGAGACCACCCGCAAGGACGCCGCCGGGGTGATCCTGTACACCGCCGAGCGCGCCACGC AAATGGCCCTGGAGGCGATCCAGATTCTCGGCGGCAATGGCTATATCAACGAATTCCCGGCAGGCCGCCTGCTGCGCGACGCCAAGCTGTACGAGATCGG TGCCGGCACCAGCGAAATCCGCCGGATGCTGATCGGCCGCGAACTGTTCAACGAAACCCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCACAAGGGACGGGCGCACATGGCTACCTTGCACACCCAGATCAACCCGCGTTCGGCGGAGTTCGCCGGCAACAGCGCGGCCATGCTCGAACAGGTCCAG GCCCTGCGCGGCCTGCTCGCCCAAGTGGCCCAGGGCGGTGGGCCCAAGGCTCAGGAGCGGCACACTTCGCGTGGCAAGCTGCTGCCGCGCGAGCGTATCG ACCGCCTGCTGGACCCAGGCTCGCCGTTCCTCGAAATCGGCCAACTGGCTGCCCATGAGGTATATGGCGAAGACGTACCCGCTGCGGGCGTGATCGCCGG CATCGGCCGCGTCGAAGGCGTGGAATGCATGATCGTGGCCAACGACGCCACGGTCAAAGGCGGTTCCTACTACCCGCTGACGGTGAAGAAACACCTGCGT GCGCAGACCATCGCCCTGCAGAACCGCCTGCCGTGCATCTACCTGGTGGACTCCGGCGGCGCCAACCTGCCACGCCAGGACGAAGTGTTCCCCGACCGCG
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| Amino Acid Sequence |
>isovaleryl-CoA dehydrogenase
MHYPTLNFALGETIDMLRDQVRTFVAAELAPRAAQIDHDNLFPADMWRKFGDMGLLGITVPEEYGGAGLGYLAHVVSMEEISRGSASVALSYGAHSNLCV NQINRNGSHEQKLKYLPKLISGEHIGALAMSEPNAGSDVVSMKLRAEKRGDHYVLNGSKTWITNGPDANTYVIYAKTDLDKGAHGITAFIVERDWKGFSR SNKFDKLGMRGSNTCELFFDGVEVPEENILGQLNGGVRVLMSGLDYERVVLSGGPTGIMQSCMDLVVPYIHDRKQFGQSIGEFQLIQGKIADMYTQLNAS RAYLYAVAQACDRGETTRKDAAGVILYTAERATQMALEAIQILGGNGYINEFPAGRLLRDAKLYEIGAGTSEIRRMLIGRELFNETR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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