Pseudomonas sp. FGI182, C163_RS06635
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. FGI182, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TTCTGCGCGGCCTCCACTATCAGGTACACCAACCCCAAGGGAAACTGGTAAGAGTAGTGGTCGGTGAAGTGTTCGATGTTGCGGTAGACCTGCGCCGTTC ATCGCGTACCTTTGGCCGTTGGGTCGGTGCCCACCTTTCAGCAAACAACAAGCACCAACTCTGGGTACCGGAAGGCTTCGCGCACGGTTTCGTAGTGTTG TCCGACCATGCGGAATTCCTGTACAAGACCACGGCCTACTACGCCCCCCAATTCGAACGTTGCCTAGCCTGGAATGACCCAGCGGTCGGCATTCAATGGC CTATTGAGCAGCCGTTCCTATCAGGCAAGGACCGATTGGGCAAAACGCTGCAAGAGTTGGAGTGCTTCGATTGAACGAAGTAACCCGCGCGGTCATGGTC GAGTGGCATGTTGATGTCGCCTCTCGCTCTCGGATCAATCGCCGACAGGCTAGAATCCAGAAAGTGGGGGAGCAGAACATGACAGCGGAAGCAGACAAAT
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| DNA Sequence for Gene |
>C163_RS06635
ATGACCATTCTGGTAACCGGCGGTGCAGGCTTTATCGGCGCGAACTTCGTGTTGGACTGGCTGGCCGGCAATGACGAGCCCGTGGTCAACCTCGATAAAC TTACCTACGCAGGCAACCTGCAGACCCTGAGCAGCCTGCAGGACGACGCGCGGCACATTTTCGTGCATGGCGACATTGGTGATTCCGCGCTGGTAGAGCA GCTGCTGAAAACCCACCAGCCACGCGCCATCGTCAACTTTGCCGCCGAGTCCCACGTCGACCGCTCGATCCACGGCCCGGAAGACTTCATCGAAACCAAC ATTGTTGGCACCTTCCGCCTGCTGGAAGCCGTACGCGCCTACTGGGGCGGCCTGGGTGAGCAGGCGCGCGTGGCCTTCCGTTTCCTGCATGTGTCCACCG ACGAAGTGTACGGTTCGCTGGCCACCGACGAACCGGCCTTCACCGAAACCCACCAGTACCAGCCCAACAGCCCGTACTCGGCCAGCAAGGCCGCCAGCGA CCACCTGGTGCGCTCGTACCACCACACCTACGGCCTGCCGGTGCTGACCACCAACTGCTCGAACAACTACGGCCCTTACCACTTCCCGGAAAAGCTCATC CCGCTGATGATCGTCAACGCCCTCGCCGGCAAACCGCTGCCGGTATACGGCGACGGCCAGCAGATTCGCGACTGGCTGTACGTCAAGGACCACTGCAGCG CCATCCGCCGCGTGCTGGAAGCCGGCAAGACCGGCGAGGTGTACAACGTGGGCGGCTGGAACGAAAAGCCCAACCTGGAAATCGTCAACCGCGTGTGCGC CCTGCTGGACGAACTGCGCCCCCGTGCCGACGGCAAGCCCTACGCCGAGCAGATCACCTATGTGACCGACCGCCCAGGCCATGACCGCCGCTACGCCATC GACGCCTGCAAGCTCGAGCGCGAACTGGGTTGGAAGCCTGCCGAAACCTTCGAAACCGGCATTCGCAAGACCGTGGCCTGGTACCTCGACAACCAGGAGT GGGTGCAGAACGTACAGTCCGGCAGCTACCGCGACTGGGTCGAGAAAAACTACGCAGGGCGCTCGGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGATTCTGCTATTGGGCAAGGACGGTCAGGTAGGTTGGGAGCTGCAACGCAGCCTGGCCCCGCTGGGCCAGGTGCTGGCGCTCAATTCCCGCAGCCAGGC ACACTGCGGCGACCTGGCCAACCTGCCGGGCCTGGCCGAAACCGTGCGCGCCTACGCACCCGATGTAATCGTCAACGCCGCCGCCTACACTGCCGTGGAC AAGGCGGAAAGCGACCGCGAACAAGCCTTCAAGGTAAACGCCGAAGCCGTCGGCGTGCTGGCCCGCGCCGCCGCCGGCTGCGGAGCATTGCTGGTGCATT ACTCCACCGATTACGTGTTCCCAGGGCAGGGCACTCAAGCCTGGCGCGAAGACGACAGCGTCTGCCCACTGAATGCCTATGGCGAAAGCAAGCTGGCCGG CGAACAGGCCATCCAGGCCGCCGGTTGCCAGCACCTGATCTTCCGAACCTGCTGGGTGTATGCCGCACGCGGCAACAACTTCGCCAAGACCATGCTGCGC
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| Amino Acid Sequence |
>spore coat protein
MTILVTGGAGFIGANFVLDWLAGNDEPVVNLDKLTYAGNLQTLSSLQDDARHIFVHGDIGDSALVEQLLKTHQPRAIVNFAAESHVDRSIHGPEDFIETN IVGTFRLLEAVRAYWGGLGEQARVAFRFLHVSTDEVYGSLATDEPAFTETHQYQPNSPYSASKAASDHLVRSYHHTYGLPVLTTNCSNNYGPYHFPEKLI PLMIVNALAGKPLPVYGDGQQIRDWLYVKDHCSAIRRVLEAGKTGEVYNVGGWNEKPNLEIVNRVCALLDELRPRADGKPYAEQITYVTDRPGHDRRYAI DACKLERELGWKPAETFETGIRKTVAWYLDNQEWVQNVQSGSYRDWVEKNYAGRSA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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