Pseudomonas sp. FGI182, C163_RS06485
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. FGI182, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CAGAAGAACATCGGCCCGAGCGGCCTGGTCGTGGTGATCGTGCGCGAAGACCTGCTGGGCCGCGCCCGCAGCAGCTGCCCGACCATGCTCGACTACAAGG TCTCGGCCGACAACGGCTCGATGTACAACACCCCGGCCACCTACTCCTGGTACCTCTCGGGCCTGGTGTTCGAATGGCTGAAAGAGCAGGGTGGCGTCGA TGCCATGGAGCAGCGCAACCGCGCCAAGAAAGACCGCCTGTACGGTTTCATCGACAGCAGCGAGTTCTACACCAACCCGATCAGCCACAACGCCCGTTCG TGGATGAACGTGCCGTTCCGCCTGGCTGACGAGCGCCTGGACAAGGCCTTCCTCGCCGGCGCCGATGCCCGTGGCCTGCTCAACCTCAAAGGCCACCGTT CGGTAGGCGGCATGCGCGCCTCCATCTACAACGCCCTGGGTCTTGAAGCAGTCGAAGCCCTGGTGGCCTACATGACCGAATTCGAGAAGGAGCACGGCTG
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| DNA Sequence for Gene |
>C163_RS06485
ATGTCCGAGCACGAACTGAAGGCGCTGCGCGTTCGCATCGACAGCCTCGACGAGAAGATCCTCGAGCTGATCAGCGAGCGCGCCCGTTGCGCCCAGGAAG TGGCCAAGGTCAAGACCGCCTCGCTGGCGGAAGGCGAAAAGCCGGTGTTCTACCGCCCCGAGCGTGAAGCCGCCGTGCTCAAGCGCGTGATGGAGCGCAA CAAGGGCCCGCTGGACAACGAAGAGATGGCGCGACTGTTCCGCGAAATCATGTCGTCGTGCCTGGCCCTGGAAGAGCCGCTGAAAATCGCCTACCTCGGC CCTGAAGGCACCTTCACCCAGGCCGCGGCCATGAAGCACTTCGGCCACGCGGTGATCAGCCGGCCGATGGCGGCCATCGACGAAGTGTTCCGCGAAGTGG CGGCCGGTGCCGTCAACTTCGGCGTGGTGCCGGTGGAAAACTCCACCGAAGGCGCGGTCAGCCACACCCTGGACAGCTTCCTCGAGCACGACATGGTGAT TTGCGGCGAGGTCGAGCTGCGCATCCACCACCACCTGCTGGTGGGCGAGAACACCAAGACCGACAGCATCACCCGCATCTACTCCCACGCCCAGTCGCTG GCCCAGTGCCGCAAGTGGCTGGACGCGCACTACCCGAACGTGGAGCGCGTGGCCGTGTCGAGCAATGCCGAGGCGGCCAAGCGGGTCAAGGGCGAGTGGA ACTCGGCGGCGATCGCTGGCGACATGGCGGCCAACCTGTACGGTTTGACTCGCCTGGCCGAAAAGATCGAAGACCGCCCGGACAATTCCACGCGCTTCCT GATGATCGGCAGCCAGGAAGTGCCGCCGACCGGCGACGACAAGACCTCGATCATCGTTTCGATGAGCAACAAGCCGGGTGCCTTGCACGAGCTGCTGGTA CCGTTCCACCAGAACGGCATCGACCTGACCCGCATCGAGACCCGCCCATCGCGCAGCGGCAAGTGGACCTACGTGTTCTTCATCGACTTCGTCGGCCACC ACCGCGACCCGCTGATCAAGGCGGTGCTCGAGCAGATCAGCCAGGAGGCTGTGGCGCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTTGAGATGGTTGGGGCCGCTTCGCGCCCCATCGCGACACAAGGCCGCTCCTACAGGTATTGTGCAGGCCTCGAAACTGTACTGGCCCCTGTAGGAGCGG CCTTGTGTCGCGATGGGCTGCAAGGCAGCCCCAATGGCCCTCACAGGCTGTCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCAAAAACCA AACCCGCACCAATCATCAACCGCCTGGTCGTGGTCGGCCTCGGCCTGATCGGTGGCTCGTTCGCCAAGGGCCTGCGTGAAAGCGGCCTGTGCCGCGAAGT GGTCGGTGTCGACCTGGACGCCCCCTCGCGCAAGCAGGCCGTGGCCCTGGGCGTGGTCGATCGCTGCGAGGAAGACCTTGCCGCCGCCTGTGTCGGTGCC GATGTCATCCAGTTGGCCGTGCCGATCCTGGCCATGGAGAAGGTGCTGGCCCGCCTGGCCAGGCTTGACCTTGGTGATGCTGTCATCACCGACGTCGGCA
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| Amino Acid Sequence |
>prephenate dehydratase
MSEHELKALRVRIDSLDEKILELISERARCAQEVAKVKTASLAEGEKPVFYRPEREAAVLKRVMERNKGPLDNEEMARLFREIMSSCLALEEPLKIAYLG PEGTFTQAAAMKHFGHAVISRPMAAIDEVFREVAAGAVNFGVVPVENSTEGAVSHTLDSFLEHDMVICGEVELRIHHHLLVGENTKTDSITRIYSHAQSL AQCRKWLDAHYPNVERVAVSSNAEAAKRVKGEWNSAAIAGDMAANLYGLTRLAEKIEDRPDNSTRFLMIGSQEVPPTGDDKTSIIVSMSNKPGALHELLV PFHQNGIDLTRIETRPSRSGKWTYVFFIDFVGHHRDPLIKAVLEQISQEAVALKVLGSYPKAVL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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