Pseudomonas sp. FGI182, C163_RS04895

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. FGI182, complete genome. [Details]
DNA Sequence Upstream of Gene
ACCTGGCCTGGGTCGACGGCCGCCTGGTGTTCGAGAACTGCCCGCTGAGCCAGGTGCTGGCCGAGGTGCAACGCTACTACCCGGGCTGGATCATCAACCG CAATGCACAGCTGGAAGACATGGCGGTCACCGGCAACTACCGCCTCGACCAGCCGCTGGAAACCCTGCGCGCGCTGGCCCACATCACCTCGGCACAGCTG CATGAGTTCCCGGCGCTGGTCATCCTGAACTGATCCGCAAATCTGAAACCCGACACGGTCCCTGTGGGAGCGGGCGTGCCCGCGAACACGGGCAACGCCC GTGCCATCCACCGCGGTGCCTGTTTCGCGGGCATGCCCGCTCCCACAGAAATCGCGATACCGATCTCCAGACCGCAATCCAACTTTTTTTACGCAGTCAC GCTACCCCGCCCGTCTCGTTATAGCCAATGCAACTGATTCTCGTTTGAAAGCGAGGACAGCCATCACCTATAACAGTCCGCGCGTCAGGGAGCGCTTCCG
DNA Sequence for Gene
>C163_RS04895
ATGTCCACAGGTCCTACCCGCCCCTCCACTCTTCCTCGCCATGGAGGGCAACTGCCCCTCCTGAGCCTTTCCCTACTGAGCCTCGCCCTGCTCGCCAGCG GCGCCATCAGCCTGCCGGCACTGGCCGCCGAGCCGGCACAGGCCAGCAGCCCGCGCATGGGCGACTACCGCTTCAGCATCGGCCAGCAGCCGCTGGTTTC GGCCATCAATGCTTTCAGCCAGGTCACCGGCTGGCAGGTCGGCTTCAGCGCCGAACTGGCCGACGGCGTGGCATCGCCAGGGGTGCAGGGTTCGCTACCG CCGGAAGCCGCACTCAAGCGCCTGCTGCACGGCACCGGCCTGGGCTTTCGCAAGATCAGCAACGGCAATGTGGTGCTCGAACGCCAGGCCAGCGCCAATG TGATTGCCCTGCAGCAGGTGACCGTCAGCGCCACCCGCAGCGCCCAGGACGTCAGCCAGGTGCCGAGCACCGTCAGCGTGCAGACCCGCGAGCAACTGGA CCGGCAGAACGTCAACAACATCCAGGACCTGGTGCGCTACGAACCGGGCGTGTCGGTAGCCGGCACCGGCCAGCGCAGCGGCCTGAACGGCTACAACATC CGTGGCATCGACGGCGAGCGCATCCTCACCCAGGTCGATGGGGTGTCGATCCCCGACAGCTTCTTCTTCGGCCCCTACGCCCAGACCCAGCGCAACTACG TGGACCCGGAGATCGTCAAGCGTGTGGAAATCCTCCGCGGCCCGGCTTCGGTGCTTTACGGCAGCAACGCCATCGGCGGCGCGGTAAGCTACTTCACCCT CGACCCGGACGACATCATCAAGCCCGGCAAGGACGCAGGCGCCCGCCTGAAGACCGGCTACAGCTCGGCCGACGAAAGCTGGCTGACCTCCGCCACCGTC GCCGGCCGCCAGGGCGACTTCGACGGCCTGTTGCACCTGAGCCAGCGCAACGGCCACGAAACCGAGACCCACGGCGGCCACAGCGGTGACGGCCTGGCCC GTACCGAAGCCAACCCGATGGACGTGCGTACCACAAACGTGCTGGCCAAGCTGGGCTGGAACTACGCCGACGACGCGCGCCTGGGTTTCACCTACGAACG CTACAAGGATGACCGCGACCAGAACATCCTCAGTGCGGTGGGCGGGCCGTTCATTCCTGGCTTTGGTGCCTCGGGTTACTACAAGGCGCGCACTGGCAAC GACACCATCACCCGCGAACGCTTTGGCATCAACCATGAGTTCGGCCTGGATTCGCTGGTGGCCGACCATGTGAAGTGGAGCCTGAACTATCAGATCGCCA AGACCGACCAGCACACCGAAGAAGTCTACGCACCACCTGGCCGTCAGGTGCTGCGTACCCGCGACACCCTCTACAAGGATCGCCAGTGGGTATTCGACGC CCAGCTGGACAAGGCCTTCAGCCTCGGCGCCACCGACCACCTGTTGACCTACGGCACCACCCTCAAGCACGAAAAGGTCACCGGCTCCCGCAGCGGCACC GGTACCTGCCTGGCCGTTGGTTCAGGCTGTTCTGCCGCTGGCGCCGAGCGTCCGGCAGACGGCCAGGCCCTGGTCAGCGACTTCCCGGACCCGACCGTGA ACACCTACAGCCTGTTCGTGCAGGATGAAATCCGCTGGAACAACTGGACCTTCATGCCTGGCGCTCGTTACGACTACACGCGCATGGAGCCCAGGTTCAC CAAGGAATTCCTGCGTGGCCTGGAGTCCACCGGTACCGCGCCTACCTCTCAGGACGACTCGGACAAGAAGTGGCACCGCGTCTCGCCCAAATTCGGCCTG ACCTATGCCTTCAACGACAACTACACCTGGTATGGCCAGTACGCCGAAGGTTTCCGCACCCCGACTGCCAAATCCATGTACGGCAAGTTTCAGAACATCG AGCAAGGCTACCGGGTAGAAGGCAACCCGGGCCTGGAGCCTGAAAAGAGCAAAAGCTATGAAACCGGCCTGCGTGGCAACTTCGATGCTGGCAACTTCGA CGTGGCGGTGTTCTACAACAAGTACCGCGACTTCATCGACGAGGACGCCGTAAAAAGCGCCAACCTGGAGCAGACCTTCAAGGCCAACAACATCAAGCAC GCCACCATCAAGGGTGCCGAGGTCAAGGGCCGCCTGAACCTCGACCACTTCGGTGCGCCGCAGGGCCTGTATACCCAGGGCTCGATCGCCTACACCTATG GCCGCAACGATGACACCGGCGAGCCACTGAACAGCGTCAACCCGCTCAAGGGCGTGTTCGGCCTGGGTTACGAACAACAGCACTACGGCGGCCTGCTGAG CTGGACACTGGTCAAGCGCAAGACCCGCGTCGACGACAGCACCTTCTACTCGCCCGACGGCTCGAGCTCCAAGTTCCGTACCCCCGGCTACGGGGTGCTG GACCTGACCGGTTACTACAAGGTCACCGACGACGTGACCATCAACGCCGGCCTGTACAACCTCACCGACAAGAAGTACTGGCAGTGGGATTCGGTACGCA GCTACGACGGCCAGGGTGAAGCGGCCGTGACCCAGCCGGCCAACATCGACCGCCTGACCATGCCGGGGCGCAACTTCGGCATCAATGTGGTTTGGGATAT CTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCTCTTGCGCCTGTACCGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGATACTGCGCAAGCCTTGGGCCTGCGCTGGACCTGTGGGAGCGGGCATGCCCG CGAAGAGGCCAGTGCAGGCAACACGAAATCCCGATTTTTTTACTGTCCCACCCCCGCTGTTTCGTCTTGTCTCTAGACGCCCCCTTTCCAAGGACTGCCC CATGACCGACCGCCCAGCCCTGCGCTCCCAGCGCCTCAACCAGATCACCCACGCCCCCCACGCCGAACTGGATGCCCTGGTCAAAGCCCACGCGCCCTTC GACAGCCGCGAAAGCTTCGCCCGCTTCGTGGTCGCTCAGTACCTGTTCCAGGCCGAGCTGCAGGCCCTGTACAACGACCCGCAACTGATCGCCATCGTCC CCGACCTGGCGGAGCGCTGCCGCGCCGAACAGGCCCGCCTGGACCTCGCCGACCTCGACACCGAAGTACCGCCAGCCGTGCCGGGGGCCCTGCGCAACCC
Amino Acid Sequence
>TonB-dependent receptor
MSTGPTRPSTLPRHGGQLPLLSLSLLSLALLASGAISLPALAAEPAQASSPRMGDYRFSIGQQPLVSAINAFSQVTGWQVGFSAELADGVASPGVQGSLP PEAALKRLLHGTGLGFRKISNGNVVLERQASANVIALQQVTVSATRSAQDVSQVPSTVSVQTREQLDRQNVNNIQDLVRYEPGVSVAGTGQRSGLNGYNI RGIDGERILTQVDGVSIPDSFFFGPYAQTQRNYVDPEIVKRVEILRGPASVLYGSNAIGGAVSYFTLDPDDIIKPGKDAGARLKTGYSSADESWLTSATV AGRQGDFDGLLHLSQRNGHETETHGGHSGDGLARTEANPMDVRTTNVLAKLGWNYADDARLGFTYERYKDDRDQNILSAVGGPFIPGFGASGYYKARTGN DTITRERFGINHEFGLDSLVADHVKWSLNYQIAKTDQHTEEVYAPPGRQVLRTRDTLYKDRQWVFDAQLDKAFSLGATDHLLTYGTTLKHEKVTGSRSGT GTCLAVGSGCSAAGAERPADGQALVSDFPDPTVNTYSLFVQDEIRWNNWTFMPGARYDYTRMEPRFTKEFLRGLESTGTAPTSQDDSDKKWHRVSPKFGL TYAFNDNYTWYGQYAEGFRTPTAKSMYGKFQNIEQGYRVEGNPGLEPEKSKSYETGLRGNFDAGNFDVAVFYNKYRDFIDEDAVKSANLEQTFKANNIKH ATIKGAEVKGRLNLDHFGAPQGLYTQGSIAYTYGRNDDTGEPLNSVNPLKGVFGLGYEQQHYGGLLSWTLVKRKTRVDDSTFYSPDGSSSKFRTPGYGVL DLTGYYKVTDDVTINAGLYNLTDKKYWQWDSVRSYDGQGEAAVTQPANIDRLTMPGRNFGINVVWDI
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site