Pseudomonas sp. FGI182, C163_RS04295 (hscA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. FGI182, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AGCTGGCCACTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCCGACCGCTTTGCCGACGCCTCCGAGCGCGAGCAGCGCGTGGCGCTGGAAAAGTCCGC GGCCCTCAACGACGCCTACCAGACACTGCGCAGTGCGCCGCGTCGCGCCCGCTACCTGCTGGCCATCGGCGGCCACGAAGTGCCTCAGGAAGTCACGGTC CACGACCCTGACTTCCTGTTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGACGAAGCCGACCTCGATGGCGTGGCCGTGTTCAAGAAGC GCCTGAAGGTCGCCCAGGACACGCTGAACGAGGACTTTGCCGCCTGCTGGGACGCCCCAGGCGAGCGCGACAAGGCCGAACGCCTGATGCGCCGCATGCA GTTCCTCGACAAGCTCGCCCAAGAAGTGCGCCAACTGGAAGAGCGCCTCGACGATTAACCCGGTGCTGCCCGTGATGGCACCTAAGGTATTCAGATAAGC
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| DNA Sequence for Gene |
>C163_RS04295
|hscA
ATGGCCCTACTGCAGATTGCCGAACCCGGTCAAAGCCCTCAGCCGCATCAGCGCCGCCTGGCGGTGGGGATCGACCTGGGTACCACCAACTCCCTGGTCG CCGCACTGCGCAGCGGCCGTAGCGAGCCCCTGCCCGACGCGCAGGGCAATGTCATTCTGCCGTCCGCGGTGCGCTACCTCGAAGGGCGCAACGAAGTGGG GCAGGCTGCACGCGATGCCGCTTCCAGCGACCCGCTGAACACCGTGCTGTCGGTCAAGCGTCTGATGGGGCGCGGCCTGGCCGACGTCAAGCAACTGGGC GAGCAGCTGCCGTACCGCTTCGTTGGCGGTGAGTCGCACATGCCGTTCATCGACACCGTGCAGGGGCCGAAAAGCCCGGTGGAAGTGTCCGCCGATATCC TCAAGGTGCTGCGCGAGCGTGCCGAAGCCACCCTCGGTGGTGAGCTGGTGGGCGCGGTGATCACCGTGCCGGCCTATTTCGACGATGCCCAGCGCCAGGC CACCAAGGACGCTGCGCGCCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAGCCGACCGCCGCTGCCGTGGCCTATGGCCTGGACCAGAACGCCGAA GGCGTGGTGGCCATCTATGACTTGGGCGGCGGTACCTTCGACATTTCCATTTTGCGCCTGACTGCCGGCGTATTCGAAGTGCTGGCCACCGGTGGCGATA CCGCCCTGGGTGGTGACGACTTCGACCACGCCATCGCTGGCTGGATCATCGAGCAGGCCGGGCTGTCGTCCGACCTGGACCCGGCCACCCAGCGCGCGCT GTTGCAGGCCGCCTGTGCCGCCAAGGAAGCCCTGACCGACGCCGACGTGGTCAGCGTCAGCCATGGCGCCTGGCAGGGCGAGCTGAGCCGCGCCGGCTTC GAAGCCATGATCGAGCCCATGGTTGCCCGCAGCCTCAAGGCCTGCCGTCGCGCCGTGCGTGACAGCGGTATCGAGCTGGAAGAAGTCAGCGCCGTGGTCA TGGTCGGTGGTTCGACCCGCGTACCGCGTGTGCGTGAAGCCGTCGGAGCACTGTTCGGCCGCACCCCGCTGACCTCGATCGACCCTGACCAGGTGGTGGC CATCGGTGCCGCCATCCAGGCCGATACCTTGGCCGGCAACCGCCGCGAAGGTGGCGAACTGCTGCTGTTGGATGTCATCCCGCTGTCGCTTGGCCTCGAG ACCATGGGCGGGCTGATGGAGAAGGTGATCCCGCGCAACACCACCATCCCGGTGGCGCGTGCCCAGGAGTTCACCACCTATAAAGATGGCCAGTCGGCCA TGATGATCCATGTGCTGCAGGGCGAGCGCGAGCTGATCAGCGACTGCCGCTCGCTGGCGCGCTTCGAGCTGCGGGGCATCCCGGCCATGGTCGCCGGTGC GGCAAAAATCCGCGTTACCTTCCAGGTCGACGCCGACGGCCTGCTCAGCGTCGCCGCCCGCGAGCTGGGTTCGGGCGTGGAAGCCAGCATCCAGGTCAAG CCGTCCTACGGCCTGACCGACGGCGAAATCGCCCGCATGCTCAAGGATTCCTTCGAACACGCAGGTTCCGACAAGCAGGCCCGCCAGCTGCGCGAGCACC AGGTGGACGGCGAGCGCCTGCTCGAAGCGGTACAGGGCGCCCTGGACGCCGACGGTGAGCGTCTGCTCAGCAGTGACGAGCGCGACGCCATCGAATTCCA GATGCAAGAACTACGTGATTTGCTGGCCGGCACCGATGGCGCAGCCATCGAGCAACAGACCAAGCGTCTGTCGCAGGTGACCGACGCATTTGCCGCCCGT CGCCTTGATTCGACGGTCAAAGCCGCACTGGCCGGGCGCAACCTGAATGAGATCGAGGAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCGATGCCGCTGGTGACATTCCTGCCGCACGAGAAGTTCTGCCCCGAAGGGCTGACCGTGGAAGTCGAGCCCGGGACCAACATCCTGGAGCTGGCCCACG ACCATCACATCGAGATGGAAAGCGCCTGCGGCGGCGTCAAGGCCTGCACCACTTGCCACTGCATCGTGCGCAAGGGCTTCGACTCGCTCGAAGAAGCCGA CGAGCTGGAAGAGGACATGCTGGACAAGGCCTGGGGCCTGGAGGCTCAATCGCGCCTCGGCTGCCAGGTGGTCGTCGCTGACCAGGACCTGGTCATCGAG ATCCCCAAGTATTCGCTCAACCACGCCGCCGAAGCGCCGCACTGAGGTTTGCCCCATGAGCCTGAAATGGATTGATGTACTTGAGATCGCCATCCAGCTT GCAGAAAGCAAGCCGGAAGTCGATCCTCGTTATGTGAATTTCGTCGACCTGCACAGCTGGGTGCTGGCATTGCCAGAATTCAGCGACGATCCGTCACGCG
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| Amino Acid Sequence |
>chaperone protein HscA
MALLQIAEPGQSPQPHQRRLAVGIDLGTTNSLVAALRSGRSEPLPDAQGNVILPSAVRYLEGRNEVGQAARDAASSDPLNTVLSVKRLMGRGLADVKQLG EQLPYRFVGGESHMPFIDTVQGPKSPVEVSADILKVLRERAEATLGGELVGAVITVPAYFDDAQRQATKDAARLAGLNVLRLLNEPTAAAVAYGLDQNAE GVVAIYDLGGGTFDISILRLTAGVFEVLATGGDTALGGDDFDHAIAGWIIEQAGLSSDLDPATQRALLQAACAAKEALTDADVVSVSHGAWQGELSRAGF EAMIEPMVARSLKACRRAVRDSGIELEEVSAVVMVGGSTRVPRVREAVGALFGRTPLTSIDPDQVVAIGAAIQADTLAGNRREGGELLLLDVIPLSLGLE TMGGLMEKVIPRNTTIPVARAQEFTTYKDGQSAMMIHVLQGERELISDCRSLARFELRGIPAMVAGAAKIRVTFQVDADGLLSVAARELGSGVEASIQVK PSYGLTDGEIARMLKDSFEHAGSDKQARQLREHQVDGERLLEAVQGALDADGERLLSSDERDAIEFQMQELRDLLAGTDGAAIEQQTKRLSQVTDAFAAR RLDSTVKAALAGRNLNEIEE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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