Pseudomonas sp. FGI182, C163_RS03505
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. FGI182, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCCAACTGCTGCTGCGCGAGAACGACCAGGGCCTGTTGCTGGCGGTACGCCGGGGCGACGTCACGCTGCTCCCCACCTCAGCCTCGCCACGTCGGGTGCT GCCAGGCGAAACCTTGCAGGTGTGGGCCAGCGGCAGCTTCCAGGCGGTGACGCTGCACGGCGACCCCTGGGGCTGGACCGACGGCGTGCTCAGCGTGCAA CAGATGCCGCTGGGCGAGTTCATCGCCGAGCTGGCGCGTTACCGCCCGGGCCTGCTGCGCTGTGCCCCGGAAGTGGCAGACCTGAAGGTGTCCGGTACCT ACCAGCTGGCCGACACCGCGCAGATCCTGCAGCTGCTCACCCGCAGCCTGCCGGTGCGGGTCGACTACCGCACGCGTTTTTGGGTAAGCATCGGTGCGGC CTGAAAAATTTCCGAAAATAAATGAGGTGGAATCTCATTCTCGTTCGGCCTGAAGGAACAAAACCCGAAAAGTGGTCTTCACAACCTTCAGGAGCGCTTC
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| DNA Sequence for Gene |
>C163_RS03505
ATGATTGCCCCGTGTTCCCCTCGCAACGACAGGCTGCGCCGTGCCGTGCGCGCGGCCGTGTTCGGCCTTGGCCTGGCAGCTGGCGGTGCCTTCCCGGCCA TGGCCCAGGCTGCAGTGGCCAGCCAGAGCCAGCAGACCGACTGGAACATCCCGGCCGGCCCGCTGGCCCCGGCACTGGACCAGTTGGCCCGCCAGGGCGG CCTGAGCCTGTCGTTCGACGCGAACAGCCTGCAGGGCAAGACCACCCGCGGCGTGCAGGGCCGGCATGACAGTGCAGGGGCGCTGTCGATCCTGTTGCAG GGCAGCAACGTGCAGGTCCAGCAGGAAAGCGCAACCAGCTTCCTGCTGATCCCGGCGCTGGATGTGGGAAACGCCCTTGAGCTGGGCGCGACCAGCATTT CCAGCGACCGCCTGGGCGAAACCACCGAGCACACCGGCTCCTACACTACCGGCGAAGTGACCATCGGCAAGATGCCGCAAACCCTGCGCCATACCCCGCA ATCGGTCAGTGTGATAACCCGCCAGCGCATCGATGACCAGAACATCACCAACCTGACCAACCTGCTGGAGCAGACACCCGGCGTGGTGGTCAACTACACC GACAGCGAGCGGGTGCAGTACTACTCGCGTGGCTTTGCCATCGATGCCATCCAGTACGACGGCGCCACCGTGGTGCAGAGCAGCGGTGGCGGTTCGTTCA TCCAGACCGACTCGGCGTTCATCGACCGCGCCGAAGTGCTGCGCGGCGCCACCGGCATGCTGCGGGGCGCCGGCAACCCGTCGGGCACGGTGAACCTGGT GCGCAAGCGCCCGACCCATGACCTCCAGGCTACGGGCAGCGTGACCCTGGGCTCGTGGAATGCCCAGCGCTATGTGGCCGATATCTCCGGCCCGCTGACC GAAACCGGCAACGTACGCGGGCGGGTGATCGCCGTGCATGACGACCGCGACCTGTTCCAGGACTCGCGCATGGAGCGCAAGGAAGCGTTCGGCGGCTCGC TGGCCTTCGACCTGGACGACAGCACCACGCTGACCACCGGTGTCGAGTGGACCAAGCTCGACGCCACCGGCGCCTGGGGCAATCTGCCCGCCGACGCCAG CGGCGCCCCCCTGCCCTTCGGCCGCAGCACCTATCTGGGGGCCGACTGGAACCGCTGGGACCGCAGCAACCTGAACACCTTTGCCGAACTGGAGCACCGC TTCGACAACGACTGGACCCTGAAGCTGATGGCCCTGCGTACCCACTTCGAGCTGGACGACCATGGCTTCAAGCAAACCTACATGGAGCGCGCACCGGCCA ACCTGAACCCCACCGGCAACCCGTACCTGATGCAATACCAGGTTACCGAAGGCGACGGCGGCGAGAGCCTGCAGAACAACCTGAGCGCCACCCTCAACGG CCCGTTCGACCTGTTTGGCCGCACCCACGAGCTGATGGTCGGCGTCGAACGGATTCGCAACGATTCCTACGCGTCGGCCACCAACCGGGTAATTTCCGGG CTGTACGACATCCGCTACTGGGACCCGAAAACCAGCCTGCCAGAGCCGGACATCGACATCACCGCACACCCGGTGCGCACCCGTACCACCCAGCAAGCCG CACACGCCACCTGGCGCATTTCGCTGGCCGAACCGCTGACCGCGATCATCGGCGCGCGGGCCAACTGGTACGACTACGAGCAGGAAAACAACACCGGTGC AAACGGCAAGTTCAGCGTCAACGAGAAGATCGTGCCGTACGCGGCGCTGATCTACGACCTGAATGACAACTTCAGCGTGTACGCCAGCTACACCGAGATA TTCAGCCCGCAAACAGTGGTGGACAAGAACAACTCGGTGCTCGACCCGATCATCGGCGAAGCCTACGAAACGGGCATCAAGGGCGAGTTCTACGATGGCC GGTTGAACACCAGCCTGGCGTTTTTCCGTATCAACCAGGTGGGTACGCCGGTGGATGACATGTCCACGGAGATCGGCTGCAACGGCACCACCGGCCGCTG CAAGATCGCCTCGGGCAAGAGCCGCAGCGAGGGCATCGACCTGGAAATTTCCGGCGAAGTGCTGCCGGGCTGGCAGGTCACCGGTGGCTACACCTACAAC ACCACCGAGTACCTGAAGAACTCGGCAGCCACCAATGGCAACGCGATCCGCACCACCGACCCGGAGCACATGCTGCGGCTGTTCACCAGCTACCGCCTGC CGGGCACGCTGGATGCCTGGACCATTGGCGGCGGCGTGCAGGCGCAGAGCGACATCTATTCCGAAAGCGGCACGGCCAAGGCGACCCAGGCGGGATATGC GGTGTACAACGGCATGCTCGGTTATCGCATCAACGACAACTACTCAGTGCAACTGAACGCCAACAACATCTTCGACAAGAAGTACTACCGGCAGATCGGT ACCACGGCGACGGGGTACTACTGGGGGGAGCCGCGCAATGTGTCGGTGACCTTGCGCGGGAGTTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CAGGCATTTGCCTGACCGGCTGGCACCATTCCTGTAGGAGCGGCCTTGTGTCGCGATAGGGCCGCAAAGCGGCCCCCGGGCCTCAGCAGCGCCGCAGATA TCGCCGGGGCTGCCTTGCAGCCCTATCGCGACACAAGGCCGCTCCTACAGGGACCGCGCAGCCCTGGAAAACCTCAGTCCGCCACCGCCCGCAACCGCCC CGCGCGCCGGTACGACTGCCGGGCAAAGCACACGAACAACCCGGCCATCAGCGCCAGCGCGATGGGCAGACCATGCGGCGCCACATCCATCGCCGCACCG CTGACCAGCGGCCCGACCAGGCTACCCACACCCCACAGCAAGCCCACGCTGGCATTGGCGGTAACCAGGTCCTGCCCCTTGAAGCGCTGCCCGATCAGTA CCAGCGCCAGGGTATAGATGCCGCCTGCCACGGCGCCCAGCAGCACCAGCAGCGGCCATAGCAACCAGGTCAGGTTCAGCAGCCAGGGCAGGCCGATACC
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| Amino Acid Sequence |
>membrane protein
MIAPCSPRNDRLRRAVRAAVFGLGLAAGGAFPAMAQAAVASQSQQTDWNIPAGPLAPALDQLARQGGLSLSFDANSLQGKTTRGVQGRHDSAGALSILLQ GSNVQVQQESATSFLLIPALDVGNALELGATSISSDRLGETTEHTGSYTTGEVTIGKMPQTLRHTPQSVSVITRQRIDDQNITNLTNLLEQTPGVVVNYT DSERVQYYSRGFAIDAIQYDGATVVQSSGGGSFIQTDSAFIDRAEVLRGATGMLRGAGNPSGTVNLVRKRPTHDLQATGSVTLGSWNAQRYVADISGPLT ETGNVRGRVIAVHDDRDLFQDSRMERKEAFGGSLAFDLDDSTTLTTGVEWTKLDATGAWGNLPADASGAPLPFGRSTYLGADWNRWDRSNLNTFAELEHR FDNDWTLKLMALRTHFELDDHGFKQTYMERAPANLNPTGNPYLMQYQVTEGDGGESLQNNLSATLNGPFDLFGRTHELMVGVERIRNDSYASATNRVISG LYDIRYWDPKTSLPEPDIDITAHPVRTRTTQQAAHATWRISLAEPLTAIIGARANWYDYEQENNTGANGKFSVNEKIVPYAALIYDLNDNFSVYASYTEI FSPQTVVDKNNSVLDPIIGEAYETGIKGEFYDGRLNTSLAFFRINQVGTPVDDMSTEIGCNGTTGRCKIASGKSRSEGIDLEISGEVLPGWQVTGGYTYN TTEYLKNSAATNGNAIRTTDPEHMLRLFTSYRLPGTLDAWTIGGGVQAQSDIYSESGTAKATQAGYAVYNGMLGYRINDNYSVQLNANNIFDKKYYRQIG TTATGYYWGEPRNVSVTLRGSF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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