Pseudomonas sp. FGI182, C163_RS01915
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. FGI182, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AAGAGAACGAACCCTTCGACGTAGCTCTGCGTCGTTTCAAGCGCTCCTGCGAAAAAGCCGGTGTACTGGCTGAAGTTCGTAGCCGCGAGTTTTACGAGAA GCCGACCGCCGAGCGTAAGCGCAAAGCAGCTGCTGCTGTTAAGCGTCACGCCAAGAAAGTTCAGCGCGAACAGCGCCGCGCCGTTCGTCTGTACTAATAC AGACGTTCTACGCAAAGCTTCTGCCCTGCCCGGCTAACCGCCGGGCGATGGCAGTGGTCGCTTCAAACTTGAGCAGCTAGCTCAAGGCCCTGCACAAGCT TCATGCGAACTGCACATGGGCAACCTGCCTGAAACGTCAGAGCTGGTCCTCCTTGTTGTATGACCAGACGTGCACGTCCGACTGACGGGCCCTCAGGGGC CGGCGACGAGCACACATTCCCTCGCACTTTCCCAAGCGGCACTCGCCCCATTCGGCGCGTGAGCGATTAGACTTGCCAGCTGCCAGATGACGAGACTGCC
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| DNA Sequence for Gene |
>C163_RS01915
ATGGCCGGGCTGATTCCCCAGAGTTTCATCGACGACCTTATCAACCGCCTCGACATCGTCGACGTGGTGAGTTCGCGCGTCCAGCTGAAAAAAACCGGCA AGAACTACTCCGCCTGCTGCCCGTTCCACAAGGAAAAGACCCCTTCCTTCACGGTCAGCCCCGACAAGCAGTTCTACTACTGCTTCGGCTGCGGTGCCGG CGGCAACGCCCTGGGCTTCGTCATGGACCACGACAACCTGGACTTCCCCCAGGCCGTCGAGGAGCTGGCCCGCGCCGCCGGCATGGAAGTGCCCCGCGAG CAAGGCCGCCGCGACCACAAGCCGCGCCAGCCAACCGACTCGCCACTGTACCCGCTGCTGGACGCCGCCTCCGAGTTCTACCGCCAGGCCCTGCGCAGCC ACCCGACCCGCAAGGCGGCTGTGGATTACCTCAAGGGCCGTGGCCTGTCCGGGGAAATCGCCCGCGACTTCGGCCTGGGCTTCGCCCCACCAGGCTGGGA CAACCTGCTCAAGCACCTGGGTGCCGACACTCTGCAGCAGAAGGTGATGATCGATGCCGGCCTGCTGATCGAGAACGCCGAAAGCGGCAAGCGCTATGAC CGCTTCCGCGACCGGGTGATGTTCCCGATCCGCGACAGCCGCGGGCGCATCATCGCCTTCGGTGGCCGGGTGCTCGGCGACGACAAACCCAAGTACCTGA ACTCCCCGGAAACCCCGGTGTTCCACAAGGGCCAGGAACTCTACGGCCTGTACGAGGCACGCAAGCACAACCGCAACCTCGACGAAATCATCGTCGTCGA GGGTTACATGGACGTCATTGCCCTGGCCCAGCAGGGCCTGCGCAACGCCGTGGCCACCCTCGGCACCGCCACCAGCGAAGAGCACCTCAAGCGCCTGTTC CGCGTGGTACCCAGCGTGCTGTTCTGCTTCGACGGTGACCAGGCCGGGCGCAAGGCCGCCTGGCGCGCCCTGGAGTCGACCCTGTCGAACCTGCAGGACG GCCGCCGCGCGCGCTTCCTGTTCCTGCCCGAAGGCGAAGACCCGGACAGCCTGGTGCGCGCCGAAGGCACCGATGCCTTCATGGCCCGCATCAACCAGCA CGCCCAGCCGCTGGCCGATTACTTCTTCGAGCAACTAGGCGTCGAAGCCGACCCGCGCTCGCTGGAAGGCAAGGCGCATATGGCGACCCTGGCCGCACCG CTGATCGAAAAGATCCCCGGCGCCAACCTGCGCCAGCTGATGCGCAACCGCCTGAAGGAAATCACCGGCCTCGACCCGCAGCAGGTCGAGCAACTGGCGC AACACGCCCCGGCCGCCAGCAGCGTGCCGGACTACGACCCTGGCTACGACTACGACGCCATGGCCAGCTACACCCCCGACTACGGCGACATGCCGCAGCA CGACTTCGCCCCCGTTCATCAGGAACAGGAGTGGAAGCCGAACAAGGGCGCGGGCAAGAAGCAGTGGAGCGACAAACCCTGGGACAAGAACCGCAAGGGT GGCAAGCCATGGCAGCAACGTGACGAAGCGCCACCACGCGTACCGGCCCCGGTCGAGCCGCCCACCCTGGCCGCCCTGCGCACCCTGCTGCACCACCCGC TGCTGGCCGGCAAGGTGGAGGATGCCAGCCACTTCGCCGACGAAGAACACCTGTACAGCCAGCTTCTGGTGGCACTGATCGAAGCCGCGCAGAAAAATCC TGGGCTAAGCTCAATGCAGTTGATCGCACGTTGGCACGGCACCGAACAGGGGCGCCTGCTGCGGGCTCTGGCGGAAAAGGAATGGCTGATCGTGGCCGAC AACCTTGAACAACAGTTTTTCGACACTATAACTAGCTTGTCCGCCCGCCAACGCGAGCGCAGCCTGGAACAACTGCTCAGGAAATCACGTCAAAGCGAAT TGACCAGCGAGGAAAAAACCCAGCTCCTCGCCCTGCTGAGCCGGAATGTTCCCGCACAAACGCCGACCTCATCTGGCGCGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCCCATGCTCGGGTATAATCCTCGGCTTGTTTTTTGCCCGCCAAGACCTTCAGTGGATAGGGTGTTATGTCCGGAAAAGCGCAACAGCAGTCTCGTATC AAAGAGTTGATCACCCGCGGTCGTGAGCAGGGCTACCTGACTTACGCGGAGGTCAACGACCACCTGCCTGAGGATATTTCAGATCCGGAACAGGTGGAAG ACATCATCCGCATGATCAACGACATGGGGATCAACGTATTCGAGAGTGCTCCGGATGCGGATGCCCTTCTGTTGGCGGAAGCCGACACCGACGAAGCCGC GGCCGAAGAAGCCGCTGCTGCGTTGGCGGCAGTTGAAACCGATATCGGCCGCACGACCGACCCGGTGCGCATGTACATGCGCGAAATGGGTACCGTCGAG CTGCTGACCCGCGAAGGCGAGATCGAAATCGCCAAGCGTATCGAGGAAGGCATCCGTGAAGTCATGGGCGCCATCGCCCACTTCCCGGGCACTGTCGACT
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| Amino Acid Sequence |
>DNA primase
MAGLIPQSFIDDLINRLDIVDVVSSRVQLKKTGKNYSACCPFHKEKTPSFTVSPDKQFYYCFGCGAGGNALGFVMDHDNLDFPQAVEELARAAGMEVPRE QGRRDHKPRQPTDSPLYPLLDAASEFYRQALRSHPTRKAAVDYLKGRGLSGEIARDFGLGFAPPGWDNLLKHLGADTLQQKVMIDAGLLIENAESGKRYD RFRDRVMFPIRDSRGRIIAFGGRVLGDDKPKYLNSPETPVFHKGQELYGLYEARKHNRNLDEIIVVEGYMDVIALAQQGLRNAVATLGTATSEEHLKRLF RVVPSVLFCFDGDQAGRKAAWRALESTLSNLQDGRRARFLFLPEGEDPDSLVRAEGTDAFMARINQHAQPLADYFFEQLGVEADPRSLEGKAHMATLAAP LIEKIPGANLRQLMRNRLKEITGLDPQQVEQLAQHAPAASSVPDYDPGYDYDAMASYTPDYGDMPQHDFAPVHQEQEWKPNKGAGKKQWSDKPWDKNRKG GKPWQQRDEAPPRVPAPVEPPTLAALRTLLHHPLLAGKVEDASHFADEEHLYSQLLVALIEAAQKNPGLSSMQLIARWHGTEQGRLLRALAEKEWLIVAD NLEQQFFDTITSLSARQRERSLEQLLRKSRQSELTSEEKTQLLALLSRNVPAQTPTSSGA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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