Pseudomonas sp. FeS53a, SZ55_RS26715

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. FeS53a scaffold9.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGGCTGGCCGTTGTAGCTGAAGCGGCTGGTGCCGTCGGGCATCAGGCCCTTGCCCTGGGTCGCACGGACCTTCTGGCACAGGTTGGTCTTGCCGGACTTG CAGAACTTGCACTCGCGACATTCGGCCGTGTAGAGCGGGATCACGTGGTCGCCCACCGCCAGGGAGGTGACGCCTTCGCCCACCGCCTCGACGATGCCGC CGCCTTCGTGGCCGAGGATGCACGGGAACACACCCTCGGAATCCGCGCCCGACAGGGTGTAGGCGTCGGTGTGGCAGACACCGGTGGCGACGATGCGCAC CAGGACCTCGCCCGCCTTGGGCGGCGCGACATCGACTTCGACGATCTGCAGGGGTTTGCCAGCCTCGAAGGCAACGGCGGCGCGGGACTTGATCATGGCG CTTCTCCAGCGATGTGAACGGTGGCGGGAGTGTAGATGACCTCGATTTGGTAAATAATCCGCCGCAAAGCAAAACTTTATTGCCACATAGGGATAATCCA
DNA Sequence for Gene
>SZ55_RS26715
ATGAACCGGTGGGAAGGCCTGGACGAATTCATCGCCGTTGCGGAAACCGGCCAGTTCACCGCCGCGGCTCAGCGCATCGGCCTCTCTTCATCCCAGGTGA GCCGCCAGATCGCCCGCCTGGAAGAACGCCTGCAAACCCGCCTGTTCTACCGCAGCACCCGCAAGGTGGCGCTGACCGAGGCCGGGCAGACCTTCCTGCA GCACTGCCAGCGCTTAGTAGATGCGCGGGACGAGGCTATGCGCGCCATCAGCGACCTGACCGGCGAACCCAAGGGCCTGCTGCGCATGACCTGCGCGGTG GCCTATGGCGAGCGCTTCATCGTGCCGTTGGTGAACGCCTTTATGGCGCGTCACCCGCAGCTGCGGGTCGACATCGAGCTGAGCAACCGCCCGCTGGACC TGGTGCACGAAGGCCTGGACCTGGCCATCCGCCTTGGCCGCCTGCAGGACTCGCGGCTGGTGGCGACGCGCCTTGCGCCCCGCGTCATGTACCTGTGCGC CGCCCCGAGCTACCTGGAACGCTATGGCCGGCCCCACAGCCTGTCCGAGCTGGCCCGGCACAACTGCCTGGTGGGCAGCTCGGACCAGTGGACCTTCCAG CAGGACGGCAAGGAACAGAGCCTGAGGGTGCAGGGCAACTGGCGCTGCAACAGCGGCCAGGCCGTGCTGGATGCCTCGCTACGTGGCTTCGGCCTGTGCC AGCTCCCCGACTACTACGTGCTGGACCACCTGAAGAGCGGCGAGTTGGTGTCCCTGCTGGAGCAGCATCGCCCGCCGAATACCGCCGTCTGGGCGCTGTA TCCCCAGCAGCGCCACCTGTCACCCAAGGTCCGCCAACTGGTGGATGCACTCAGGGACGGCCTGGCGTCGACCCACCCGGCGGCGTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGTGGAGGCCCGCCCATGGCGATGCAGGAAGCCGTGGACGTGTCCAGGGAAGCGCGAAGCCACCCAGGCGAACCCCAGGTACTTGAGGACCTTGCCTGC CAGGATGGCGGCGAACGCTCCCGGGTAGGCTAGCGGCACGGTGGACAACGCCAGCAGCGCCGGCGTCTGCGGCAAGGGCAGCAGGGCCACGGCGAAGAGC GCCAGCAGGCCGTACTCATGGGTCCAGCCCATCACCCGCAGCCAGGACGGGTCAGTGGCCATGGCCGGGAACCAGGCGTACAGCTGGCTCCAGCCCAGGT AGTGGGCGATCAGCATCATCCCCAGCGCACCGCAGCTGCTGCCCAGGGCGGCGAACAGGCTGACCACGCCCCAGCGCCGGGGCGCCATGAGCACGGCGGG AACCAGGACGGAGGTGATGGGATAGGCCGCCGTCAGGGTGCCGACGAAGGCCAGCCCCAGACACAGCCAGGGCAGCCGCCAGCCGTCACCGGCCCAGCGC
Amino Acid Sequence
>LysR family transcriptional regulator
MNRWEGLDEFIAVAETGQFTAAAQRIGLSSSQVSRQIARLEERLQTRLFYRSTRKVALTEAGQTFLQHCQRLVDARDEAMRAISDLTGEPKGLLRMTCAV AYGERFIVPLVNAFMARHPQLRVDIELSNRPLDLVHEGLDLAIRLGRLQDSRLVATRLAPRVMYLCAAPSYLERYGRPHSLSELARHNCLVGSSDQWTFQ QDGKEQSLRVQGNWRCNSGQAVLDASLRGFGLCQLPDYYVLDHLKSGELVSLLEQHRPPNTAVWALYPQQRHLSPKVRQLVDALRDGLASTHPAA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site