Pseudomonas sp. FeS53a, SZ55_RS03300

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. FeS53a scaffold8.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGGTCAGGCCGTAGAGCTGACGCGACAGGCCGACGGCGAAGTCGCAGATGTCGATCATCTCCTGCACTTCGCCCAGGCCTTCCTGGGCGATCTTGCCGGC CTCCCAGGAGACCAGCTCGCCGAGGTCCGCCTTGTGCGCCCGCAGCGCCTCGCCGAAGCGGCGCAGCAGCTCGCCCCGGCGCGGTGCCGGCACCTGGCGC CAGGCCTGGAAGGCGGCATCGGCCCGCTCGATGCAGGCCCGCGCCTCGTCACGGCCCTGCAGCCGCACCTGGCCGATGACGCTGCCGTCGATGGGGGTGT GCACGGCGTGATCGCCCTGCCGGTAGAGGCCGGGGGCGACGCCGAGGCGATCGAGCAATGCGGCAACCATGGGAACTCCTGGAAAGCACGGGATGAAAGG TCGGCGCCAGTATTAGCCGCTCCGGGGGCTTGCCAACAAACGACCTTTGCTCCACATATCATTCCGTTTGCTCATGAACCCCAGCCGCCCGGACCCGCCC
DNA Sequence for Gene
>SZ55_RS03300
ATGCTCAAGCGCCACATGCCCTCCCTCACCGCCCTGCAATGCTTCGAGGCCGTGGCCCGGCACCTGAGCTTCACCCGCGCGTCGGAAGAGCTGGCGCTGA CCCAGAGCGCCGTGAGCAAGCAGGTGGCGCAGCTGGAGGACATGCTCCAGCACCTGCTGTTCCGCCGCGTGCGCCGGCGCCTGCAGCTGACCCCGGCGGG TGCGCTGTACCTGGCCGAGGTGCGCAAGATCCTCACCCAGGTGGAGATGTCGACCCACTACATGCTGTCCTACGGCGGCGAGACCGAGGTGCTGCGGGTG GCGACGCCACCCACCTTCGGCGCGCGCTGGCTGATCCCGCGCCTGAAGGGCTGGCGCCTGCGCCACCCGAACATCCACCTGGACGTGCGCAACGAGCTGG AGCCGGATGCGCTGGTGCAGGGCCGCGCCGACGTGGCGCTGTTCTTCGGCCAGGGCGCACTGCCCGGCGCCGAGTGCATCCGCCTGTTCAGCGAGGAAGT GGTGCCGGTGTGCGCCCCCTCCACCCTGCCCGAGGCCCCCTTCACCGACCCCACCCAGCTCACCCGCCTGGTGCTGCTGCAGAACGCCACCCGCCCGGAA GCCTGGCACGAGTGGTTCCAGAGCCAGGGCCGGCACACCGAGCACAGCTACCACGGGCCGCGCTTCGACACCTCCTACATGTGCATCCGCGCCGCCCAGG CCGGCTGCGGCGTGGCCCTGCTGCCGCGCTTCCTGGTGGAAGAGGAGCTGGCCGAGGGCAAGCTGGCGATCCCCTGGGACCACGCCATGCCCAGCCGCAA CGCCTACTACCTGGCCTACCCCGAGCACACCGCCGAGGTACCCAAGGTGCGCGACTTCGTGCGCTGGATGCGCGAGCAGCTGGAACCGCCCCATCAGGAA AAAACGGAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ATGCAGCGGTTTTTTTCGTTTGCCGCGCCCCCGCCCGGCTGCTTGGATAACGCCATCGTCCTCGCCGCTGGAAGCCGCCGATGTCCACCGACCGCCTGTT CGACCTGGTTGCCCATGTGATCGGCCCCGACGCCGCCCACTGGGTGCGCACCCACGTGGAAGTGCCCGAGGGCCTGGCCGCCTTCCCCTTCGATGACCGG CAGGTGCACCGCGCCTGGCTGGCCGAGGCGCTCAACCTGTGCCTGTTCCACAAGCTGGTGGAGGCGGTGCCCATCGGCCGCACCTACGTCGAGGAACAGC GCGCCGCCGGGCGCCAGGTGTGCTTCGACCACGGCGCCATCCGCACCGTCGACTGGCCGGACAACGGCGCGCTGCCGCGCGGTCGCCAGGCCTTCAACCG CCTGCTGGAGCCCCTGGGCTTCACCGACGTGCGCACCTACCCGCTGACCCGCCTGAACATGACCGGGCACGCCTACCGCCACCTCGACCTGCCGGAGGAC
Amino Acid Sequence
>LysR family transcriptional regulator
MLKRHMPSLTALQCFEAVARHLSFTRASEELALTQSAVSKQVAQLEDMLQHLLFRRVRRRLQLTPAGALYLAEVRKILTQVEMSTHYMLSYGGETEVLRV ATPPTFGARWLIPRLKGWRLRHPNIHLDVRNELEPDALVQGRADVALFFGQGALPGAECIRLFSEEVVPVCAPSTLPEAPFTDPTQLTRLVLLQNATRPE AWHEWFQSQGRHTEHSYHGPRFDTSYMCIRAAQAGCGVALLPRFLVEEELAEGKLAIPWDHAMPSRNAYYLAYPEHTAEVPKVRDFVRWMREQLEPPHQE KTE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site