Pseudomonas sp. FeS53a, SZ55_RS02975

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. FeS53a scaffold8.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCCGCCCGGACGTGAACTGCATCATCCACACCCACCCGCTGCACGCCGCCGCCCTGTCGATGCTGGAAGTGCCGCTGGCGGTCTCGCACATGGACCTCTG CCCGCTGTACGACGACTGCGCCTTCCTCAAGGAGTGGCCGGGGGTGCCGGTGGGCAACGAAGAGGGCGAGATCATCTCCGCCGCCCTGGGCGACAAGCGC GCCATCCTGCTCTCCCACCACGGCCTGCTGGTGACCGGTGCCAGCATCGAGGAAGCCTGCGTACTGGCGCTGCTGTTCGAACGCGCCGCGAAGATGCAGC TGCTGGCCATGTCCGCCGGCGAGATCCGCCCCATCCCGCCGGCCCTCGGTCGTGAGGCCCACGACTGGATCTCCACGCCCAAGCGCCACGGCGCGGCCTT CAGCTACTACGCACGGCGCAGCCTGCGTCAGCACGGCGACTGCCTGAGCTGACCGCGCGCCACCACACAAGACCTTTCGTTCATTGCCCCAGGTGCACCC
DNA Sequence for Gene
>SZ55_RS02975
ATGTCCTCTTCCATCCTCCACGGCATCATCGGCTACACCATCACCCCCTTCGGCGCGGACGGCGCCCTCGACCTGCCGGCCCTCGGCCACTCCATCGAAC GCCTGCTGGACGGCGGCGTGCACGCCATCGCGCCCCTGGGCAGCACCGGCGAAGGCGCCTACCTCAGCGACCCGGAATGGGACGCTGTGGCGGAATTCAG CCTGAGCACCGTCGCCGGCCGCGTGCCGAGCATCGTCAGCGTGTCCGACCTGACCACCGCACGCACCGTGCGCCGCGCCCGCCTGGCCGAGCAGCTGGGC GCCAGCGCGGTGATGGTGCTGCCGGTGTCCTACTGGAAGCTCAGCGAGGCGGAGATCCTTGCCCACTACCGCGCGGTGGGCGAAGCCATCGGCATCCCGG TGATGCTCTACAACAACCCGGGCACCAGCGGCACGGACCTGCCGGTGGAGCTGATCCTGCGGATCGTCCGGGAGGTGGAGAACGTCACGATGGTCAAGGA GAGCACCGGCGACATCCAGCGCATGCACCGGCTGCACCTGCTCTCCGACGGCCAGGTGGCCTTCTACAACGGCTGCAACCCGCTGGCGCTGGAGGCCCTG GTGGCTGGGGCGAAAGGCTGGTGCACCGCCGCGCCCAACCTCATCCCCCGGCACAACCTGGCGCTCTACGAGGCGGTGCGCGAGGGACGCCTGGACGAGG CGCGGCAGTCCTTCTATCGCCAGCTGGCGCTGCTGGACTACATCACCCGCCGGGGCCTGCCCACCACCGTCAAGGCCGGCCTGCGCCTGACCGGGCTGGA CGTGGGCGTCCCGCGCCTGCCCCTGCAGGCGCTGGATGACGAAGGGCAGCGCTACCTGAGCGGCCTGCTG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCGGCCTGCGCCTGACCGGGCTGGACGTGGGCGTCCCGCGCCTGCCCCTGCAGGCGCTGGATGACGAAGGGCAGCGCTACCTGAGCGGCCTGCTGGCCG ACCTGCGCTGACCGGCGGCCCCGCCCGTCGCACGGCGGGCGGGGCGGCTCAATCGCGGTAGTCCGGTGCCACCCGGTCCAGCAGGCGCAGCAGCGCCTGC CAGGCCAGTTCGTTGGCATCCGGGTCGCTCAACTCGCCGTCCGCCAGCGGGCGCGCGGGTTCGTTGAACTGGCGCTGGGTGTGTTCGCAGACCTCGTGGG ACGGCAGCAGCAGCTCGCCGCCGGCCTGGGCGGCCAGCTGGATGTCGCAGGCCTTCTCCAGGTAGTACATGCGCAGGAAGGCCTGGGCCACCGTCTCCCC CACCGTCAGCAGGCCGTGGTTGCGCAGGATCATCACCGGCTTGTCGCCGAGGTCAGCCACAAGGCGCTTCTGCTCGTCGAGGTTCAGCGCCACGCCCTCG
Amino Acid Sequence
>dihydrodipicolinate synthase
MSSSILHGIIGYTITPFGADGALDLPALGHSIERLLDGGVHAIAPLGSTGEGAYLSDPEWDAVAEFSLSTVAGRVPSIVSVSDLTTARTVRRARLAEQLG ASAVMVLPVSYWKLSEAEILAHYRAVGEAIGIPVMLYNNPGTSGTDLPVELILRIVREVENVTMVKESTGDIQRMHRLHLLSDGQVAFYNGCNPLALEAL VAGAKGWCTAAPNLIPRHNLALYEAVREGRLDEARQSFYRQLALLDYITRRGLPTTVKAGLRLTGLDVGVPRLPLQALDDEGQRYLSGLL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site