Pseudomonas sp. FeS53a, SZ55_RS01200

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. FeS53a scaffold71.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCGTGGCGGTCGCTGAGCTGGCGCACCAGGGCCAGCAGGCGTTCGGGGTCGTCGAACACTTCGGCCTGGCCCCAGGCGTGCACGGCGATGTAGTTCCAGG TGGGCACCGCCTTGCCGTGCTCGGCCTTGCTCGGGTACCAGCCGGGGTGGACGTAGGCGTCCGGGCCGCTGAACACCACCAGGGCCTCGCTGCCAGCGGC CAGGTCGCGCCAGTGCGGGTTGGCCCGGGCGAAGTGGCCGTAGAGGGTGCCGAACTCGCCTTCGCCGGGGGCCAGCAGCAGCGGCAGGTGGCTCGCCTGC AGGCCCTGGGGGCCGGCGCTGGTGAGCAGTGCGAGGCCGCTGGCGTCGATCTGGGCGTGGAGCTGGGCCAGGTCGTCCTGGCGGAAGGCGGCGGGGCAGT ACATGGTCGGTCTCCTCGGCGATGGCTTCATGCTAGGCAGGGAATTGGCCTTGTGTAAGATCCATTGGCCGCCACTTTCATAGAGCCAATCGAGGCCGCC
DNA Sequence for Gene
>SZ55_RS01200
ATGACCGCCACGCCCCCCTTGCCCGTCGACCTATCCGGCATCCGCCTGGACCCTGCGCGGGGGCTGTCCCGCCAGCTCTACGAGGCGCTGCGCGAACGCA TCCTCGACGGGCGCCTGGGCAGCCGCACGCGCCTGCCCGCCAGCCGCGACCTGGCGGCGCTGCTGGGCATCTCCCGCAACACCGTGACCCGCGCCTTCGA CCAGCTCTACGCCGAGGGCTATGTGGAGGGGCGGGTGGGCGACGGCACCTACGTGGTGGAGTTATCCACAAGCCCGCCGGTGGCCCTGCCCGAACCGCCC GGGCCGGCGCCGAGCCTGGCCCTGGAGCGCCTGGAGCGGCATCACCTGCCGGCTTCGCCGGAGCGCGCGCCCCGGGCCTTTCGCATCGGCGTGCCGGCCT TCGACCTGTTTCCCTTCGAGACCTGGGCGCGACTGTCTGCGCGCTTCTGGCGCAAGCCGTCGCTGGCGCGCCTGGGCTATGGCGACCCGGCGGGCGACCG GGGCCTGCGCGAGCTGGTGGCGGCCTACCTGCGCAGCAGCCGGGGCCTGGCCTGCGATGCGGAGCAGGTGGTGATCACCTGCGGTGCGCAGCAGGCCATC AGCCTCTGTGCGCAGTTGCTGGTGCAGCCGGGGGACCGGGTGGCTGTGGAAAACCCCGGCTATCGCGCGGCGGGCCACGCGTTCGCGGTGGCCGGCGCGC AAGTGGTGGGGGTGCCTGTGGACAACGAGGGGCTGGTCTGTCCGGCGCTGTCCGCTGTGGATAACTGCCGGCTGGTGTACCTGACGCCGTCCCACCAGTA CCCGACGGGGGTGACGCTGTCCCTGGCGCGGCGCCTGGAGCTGCTGGAGTGGGCCGAGCGCGAGGGCGGCTGGATCATCGAGGACGACTACGACGGCGAG TACCGCTACAGCGGGGTGCCGCTGGCGCCCCTGGCCTCGCTGGACCGGCAGGGGCGGGTGCTCTACGTCGGCACCTTCTGCAAGATCGCCTTCCCGGCCC TGCGCCTGGGCTACCTGGTGCTGCCACCGGCCCTGGCCCAGCCCTTCGCCCGGCGGCTGGCCCTGGACATGCGCCATTCGGAAATCGGCACCCAGGCGGT GATGGCGGAGTTCATCGCCGCCGGGCACTTCCAGCGCCACGTCCGGCGCATGCGCCAGGCCGCCCGGGCGCGTCGCGATGCCTTGCTGCGGGACTGGCCG GCGGCGATTCCCGGTTGTGCACCGATGCCGGCGGTGGAAGCGGGGCTGCACCTGTGCATCCGCGTCGACAGCCTGGCGCGGGAGCAGGCACTGCTGGGCG CCGCGCGGGCGGCGGGGGTGGAGATGAACGGGTTGAGCGGCTATTGGCTGGAGGACAGTGACGAGCCTGTGGATAACCGTGCCGGGCTGGTGCTGGGCTT CGCCGCTGTGCCCGAGCCGGAGATTGCCGAGGCGGTGCGGGTGTTGCGCCGGGCCTGGCGGGTGTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTGCCGTAGAGACTTCGGTGTCGGGTGTGAGTCCGGTCGGTGGATAAATAGAGCGTTATCCACCTTACGCAATGACCGGCACCCGTAGGGGACGTGCTTC ACCGATCCACCAGCGGAGCTGCGGCGGGTCCGGATGGTGGGCTGAAGCCCACCCTACGCCTGGGCAGCCCCCGTAGCCTGGGCTTCAGCCCAGGGATGTT CGGCTCCAGGTCCCCGGGCTGAAGCCCGGGCTACGGCTGGCAGGTGCGGATGCCGCAGGGGGAGGCTTTGGTGTCGGGTGTGAGTCCGGTCGGTGGATAA AAAGAGCGTTATCCACCCTACGCAATGATCGGCACCCGCAGGGGGATCGCGTTTCATCGATCCACCAGCGGTGGGCTCCGATGGTGGGCTGAAGCCCGCC CTACGTGGGGCACTTTTCCACAGGCAAAAAAAAGGATGGTCAGACGACCATCCTCTGGAATGAGGGGCTACGCCCCTCCTGGTGAGACGGTAAGGCTCAG
Amino Acid Sequence
>GntR family transcriptional regulator
MTATPPLPVDLSGIRLDPARGLSRQLYEALRERILDGRLGSRTRLPASRDLAALLGISRNTVTRAFDQLYAEGYVEGRVGDGTYVVELSTSPPVALPEPP GPAPSLALERLERHHLPASPERAPRAFRIGVPAFDLFPFETWARLSARFWRKPSLARLGYGDPAGDRGLRELVAAYLRSSRGLACDAEQVVITCGAQQAI SLCAQLLVQPGDRVAVENPGYRAAGHAFAVAGAQVVGVPVDNEGLVCPALSAVDNCRLVYLTPSHQYPTGVTLSLARRLELLEWAEREGGWIIEDDYDGE YRYSGVPLAPLASLDRQGRVLYVGTFCKIAFPALRLGYLVLPPALAQPFARRLALDMRHSEIGTQAVMAEFIAAGHFQRHVRRMRQAARARRDALLRDWP AAIPGCAPMPAVEAGLHLCIRVDSLAREQALLGAARAAGVEMNGLSGYWLEDSDEPVDNRAGLVLGFAAVPEPEIAEAVRVLRRAWRV
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site