Pseudomonas sp. FeS53a, SZ55_RS18350

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00082
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00082
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00304
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 593 607 2.0E-16
PANTHER PTHR43065 SENSOR HISTIDINE KINASE - - 239 666 4.7E-66
CDD cd06225 HAMP - - 189 233 5.13323E-8
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 289 403 1.1E-5
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 611 621 2.0E-16
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 494 663 6.16E-39
Gene3D G3DSA:1.10.287.130 - - - 405 501 2.5E-22
Pfam PF08448 PAS fold IPR013656 PAS fold-4 295 398 2.6E-8
Pfam PF00672 HAMP domain IPR003660 HAMP domain 184 235 1.0E-8
SMART SM00388 HisKA_10 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 413 503 5.4E-7
Gene3D G3DSA:6.10.340.10 - - - 157 244 1.5E-13
CDD cd00082 HisKA IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 417 499 1.21728E-6
SUPERFAMILY SSF47384 Homodimeric domain of signal transducing histidine kinase IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily 409 503 6.87E-8
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 504 667 8.4E-42
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 554 664 1.3E-23
Coils Coil Coil - - 553 573 -
SMART SM00304 HAMP_11 IPR003660 HAMP domain 186 239 1.0E-8
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 276 396 2.27E-12
SUPERFAMILY SSF158472 HAMP domain-like - - 186 235 1.7E-7
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 624 642 2.0E-16
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 551 665 2.3E-28
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 649 662 2.0E-16
Pfam PF00512 His Kinase A (phospho-acceptor) domain IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 415 500 6.9E-10
SMART SM00091 pas_2 IPR000014 PAS domain 288 356 9.6E-4
Gene3D G3DSA:3.30.450.20 PAS domain - - 268 400 1.1E-14
Coils Coil Coil - - 227 272 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.