Pseudomonas sp. FeS53a, SZ55_RS20120

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. FeS53a scaffold6.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TACTCCCGGGCGATGAGGGCCAGGGTGCGCAGCTGGTCCGACGACAGCGTGCCGTAGGGGATGGCCACCCGCAGCATGTAGGCGTGCTTCTGCAGGTACA GGCCGTTCTGCAGGCGCAGGGGCAGGAACTCTTCCTCGCTCAGCTCGCCGCTCAGCCGCCGCGCCACCTGGTCACGGAACTGCGCGACGCGTTCGCGGAC CAGGGCGCGATCGTAGTCGTCGTATCGGTACATGGGGATCCTCATCGGGCCGCCGGAGGCGGCAATCGTCCGGGTAGCCACTATGGCGAGCCACCCGGCG CAGAAACAGAATCAGATCGAAGCAGAAATCCGATATCAGATGACCCAGGCCGCCCCTGGCGTCGCCTGGGCGCAGATGGCGCTCATCTGATCTCCTAAAA GCAGCCAAAACTGAGGCTGTTTCGTCCCGCCCCGCCTTCCTAGAGTGGCGCCCCGGTCGGCAGTGCCGGCCAGCCATTCCCACTCCTGAAGGTTTTCCGC
DNA Sequence for Gene
>SZ55_RS20120
ATGAAGACTGCAGAAATCGAACCCGCCTACGACTACCGGGTGGTGCGCCAGTTCGCGCTGATGACGGTGGTCTGGGGCATCGTCGGCATGGGCCTGGGGG TGTTCATCGCCGCCCAGCTGGTCTGGCCGTCCCTGAACCTCGACCTGCCCTGGACCAGCTTCGGCCGCCTGCGGCCGCTGCACACCAACCTGGTGATCTT CGCCTTCGGCGGCAGCGCGCTGTTCGCCACCAGCTACTACACCGTGCAGCGCACCTGCCAGGCGCGGCTGTTCGGCGGCAGCCTCGCCGCCTTCACCTTC TGGGGCTGGCAGGCCCTGGTGATCTGCCTGCTGGTGACCCTGCCCCAGGGCCTGACCACCACCAAGGAATACGCCGAGGTGGAATTCGCCGGGGCGGTGT GGATGGGCATCGTCTGGGTCGCCTACGCGGTGGTGTTCTTCGGCACCGTGATGAAGCGCCAGACCAAGCACATCTACGTCGGCAACTGGTTCTTCGGCGC CTTCATCCTGGTCACGGCGATGCTGCACATCGTCAACCACGTCGCCATCCCGGTGAGCTGGTTCAAGTCCTACCCGGTCTACTCCGGGGCCACCGACGCC ATGGTCCAGTGGTGGTACGGCCACAACGCCGTGGGCTTCTTCCTGACCACCGGCTTCCTCGGGATGATGTACTACTTCATCCCCAAGCAGGCCGGGCGCC CGGTCTACTCCTACCGCCTGTCCATCGTGCACTTCTGGGCGCTGATCACCCTGTACATCTGGGCCGGCCCGCACCACCTGCACTACACCGCGCTGCCGGA CTGGGCGCAGTCCCTGGGCATGGTGATGTCCCTGGTGCTGCTGGCCCCCAGCTGGGGCGGCATGATCAACGGCATGATGACCCTGTCGGGTGCCTGGCAT AAGCTGCGCGACGACCCCATCCTGCGCTTCCTCGTGGTGTCCCTGGCCTTCTACGGCATGAGCACCTTCGAAGGCCCGATGATGGCCATCAAGACCGTCA ACGCCCTCTCCCACTACACCGACTGGACCATCGGCCACGTGCACGCCGGCGCCCTCGGCTGGGTGGCGATGATCTCCATCGGCTCGCTCTACCACCTGAT CCCGCGCCTCTACGGCCGCGAGCGGATGCACAGTACCGGGCTGATCAACGCGCACTTCTGGCTGGCCACCATCGGCACCGTGCTCTACATCGCCTCCATG TGGGTCAACGGCATCACCCAGGGCCTGATGTGGCGGGCGGTGAACGACGACGGCACCCTCACCTACTCCTTCGTCGAGGCGCTGGAGGCCAGCCACCCCG GCTTCATCGTGCGCTTCGTCGGTGGCCTGTTCTTCCTCAGCGGCATGCTGCTGATGGCCTGGAACACCTGGCACACCGTGCGCACCACCGACCGTGCGAC GGCCCCGGCCGGCGCCACGGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGAGCGGAGCATGGATGCCGAAACCCTGAACGTGCTGTTCGGCCTGGGCACGGTGGCCTTCTTCTTCGTCGCCGTGCAGCTCAGCCTCGGGCGCAGCCAG CGCCAGCTGGACGAGGCCACCATGCTGCCGTTCGCCGACGACGAGCCCGTGGCCCGGCGCATGGAACGCGCCACCGGGCGCAGCAGCACCGGCTGCAGCT GCCCGGGCCGCTGCGACGGCAGCTGCGCCACGCGCACCGATCTGGAGGCCTGAGGACCTCAACGAGCGCGCCGGGGCGGCCCTCTCTCCCGTCCCGGTCA TGCCGGGTGGGCCGGCTTTTGCCGACTCACCCGGCTGCCGCTGGCCACAACCGAGGTGTCTTATCTACGATGCGCGACGTCTCCCGCTTCTGAATGTGCT GTTACCGCATCTAGCAACCGAGGTTTCCATGATCATCAAACCGCGCGTGCGTGGCTTCATCTGCGTCACTACCCATCCGGCCGGCTGCGAGGCCAACGTC
Amino Acid Sequence
>cbb3-type cytochrome c oxidase subunit I
MKTAEIEPAYDYRVVRQFALMTVVWGIVGMGLGVFIAAQLVWPSLNLDLPWTSFGRLRPLHTNLVIFAFGGSALFATSYYTVQRTCQARLFGGSLAAFTF WGWQALVICLLVTLPQGLTTTKEYAEVEFAGAVWMGIVWVAYAVVFFGTVMKRQTKHIYVGNWFFGAFILVTAMLHIVNHVAIPVSWFKSYPVYSGATDA MVQWWYGHNAVGFFLTTGFLGMMYYFIPKQAGRPVYSYRLSIVHFWALITLYIWAGPHHLHYTALPDWAQSLGMVMSLVLLAPSWGGMINGMMTLSGAWH KLRDDPILRFLVVSLAFYGMSTFEGPMMAIKTVNALSHYTDWTIGHVHAGALGWVAMISIGSLYHLIPRLYGRERMHSTGLINAHFWLATIGTVLYIASM WVNGITQGLMWRAVNDDGTLTYSFVEALEASHPGFIVRFVGGLFFLSGMLLMAWNTWHTVRTTDRATAPAGATA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site