Pseudomonas sp. FeS53a, SZ55_RS07895
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. FeS53a scaffold54.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCATGGCGGCCGTCAGCGGCAAGCCGTTCTTCGTCTTCCACGAGGCCTTCGACTACTTCGAGAGCGCCTACGGCCTGCGTCACGCCGGGGTGTTCAGCGT GGCGGCCGAGGTACAGCCGGGTGCCCGCCACGTGGCGGCGATGCGCGAGCGCCTGCGGGCGGCCGGCCCCAGCTGCGTGTTCAGCGAGCCGCCGGTGCGC CCGCGCCTGGCCGAGACCCTGACCCAGGGCCTGCCGGTGCGCCTGGCCGAGCTGGATGCACTGGGCATGCAGGTGCCGGTGGCCGCAGGTGGCTACGAGC GCCTGCTGGACGACCTGGCCCAGGGCCTGGCGGGGTGCCTGGAGGCGCTTTGAGGCGCCCCGGGCCACTTATCCACAGCGCGTAGCCTGCGCGCGCCCAC AAGCCACACCATCGGTCGAGTCGCGACGACTTTTCTTGGGTCGACGGTCTAACTTCCTCCCGGGACATCTCTGCCCCGGCGACAGGAGGCTCCGACCCCT
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| DNA Sequence for Gene |
>SZ55_RS07895
ATGACCCGCACCGGCTCCCCCGCGAAGACCCGCCTGCCGCTGCCCTTGCAGGCGGCTTCCGAAGACATCTGGGACAGCAAGTACCGCCTGCGCCGGCGCG ACGGTACGCCGCTGGACGACACCCCGGACCACAGCCTGCAACGGGTGGCCCAGGCCCTGGCCGAGGTGGAGCCGAAGGACGTCGAGCACTGGTACGAGCG CTTCCTCTGGGCCCTGCGCCAGGGGGCGCTGCCGGCCGGGCGCATCCTCTCCAACGCCGGTGCCCAGGCCCACAAGCCGGCCACCTCGACCATCAACTGC ACCGTCTCGGGGGTGATCCATGACGCCATGGACGACATCCTCGGCAAGGTCCACGAAGCCGGCATGACCCTCAAGGCCGGCTGTGGCATCGGCTATGAGT TCAGCACCCTGCGCCCCCGGGGCGCCTTCGTTTCCGGTGCCGGGGCGCACACCAGCGGGCCGCTGTCGTTCATGGACGTGTATGACCGCATGTGCTTCAC CGTCAGCTCCGCCGGGGGCCGGCGTGGGGCGCAGATGGCCACCTTCGACATCGCCCACCCGGACGTGCGCGAGTTCATCCGCGCCAAGCGCGAGGACGGC CGCCTGCGCCAGTTCAACCTCAGCCTGCTGGTGACCGATGCCTTCATGCAGGCCGTGGAGCAGGACGCCGAGTGGCCGCTGGTGTTTCCCCTGCATGCCC GCGAGCTGGACGAGGTGGACCTGGACGACCCGGCTCAGGTGCTCTGGCGCGACTGGCCGATCCACGCGGGCTACCAGGTGCGGGAGGACGGCCGGGTGGC CTGCCGCATCTACGGCCGGCTCAAGGCGCGGCACCTGTGGGACATGGTGATGGCCTCCACCTACGACTACGCCGAGCCGGGCTTCATCCTCATCGACCGG GTCAACGCGCTGAACAACAACTGGTGGTGCGAGGCGATCCGTGCCACCAACCCCTGCGGCGAGCAGCCGTTGCCGCCCTACGGTTCCTGCCTGCTGGGCT CGATCGACCTGACCCGCTTCGTCGACGACCCGTTCACCGACCAGGCGCGGTTCGACTGGGAGCGCTTCCGCGAGGTGGTGAAGGTCTTCACCCGCCTGCT GGACAACGTGGTGGAGATCAACGGCCTGCCCCTGGCGCAGCAGCGCGAGGAGATCACCGGCAAGCGCCGCCATGGCATGGGCTTCCTCGGGTTGGGGTCG GCGCTCGCCCTGCTCGGCCTGCGCTATGGCAGCCCGGAATCCTGCGTGTTCACCGAGGAAGTGGCCCGCGAGATGGCCCTGGTGGGCTGGCAGGCAGCCC TCGACCTGGCGAAGGAGAAAGGCCCGGCACCGCTGCTGGCGCAGCGCTTCACGGTGACCGAGGCGATGCTCCGGCAGCGCCCGGAGATGGCTGCCGACGG CTACAAGGTGGGTGACTCGGTGCCCGGCAGCGTGCTGCATGCGCGTTACTCGCGCTACATGCAGCGCATCGCCGAGCACGCGCCGGAGCTGGTGGCGCAA CTGGCCGAGGTGGGTGCGCGCTTCACCCACCACAGCTCCATCGCCCCCACCGGCACCATCAGCCTGAGCCTGGGCAACAACGCCTCCAACGGCATCGAGC CGAGCTTCGCCCACGTCTATTCGCGCAACCTGATCCGCCCCGGGCGCAAGACCAAGCAGAAGGTCGAGGTGGTCAGCTACGAGCTGCTGGCCTACCGCGC CCTGGTGGACCCGCAGGCGGCGCCCGGGGCCGATTCGGCGGGCCATGGCCTGCCCGAGTGGTTCGTCACCGCCGAGGACATCACCCCCGCCCAGCACGTG GACATCCAGGCGGCGGCGCAGAAGTGGGTCGACTCCTCCATCTCCAAGACCGCCAACGTGCCCACCGACTACCCCTTCGAGGCCTTCAAGGACATCTACC TCTACGCCTGGCGCCAGGGCCTGAAGGGCTGCACCACCTTCCGCTTCAACCCGGCGGCCTTCCAGGGTGTGCTGGTGAAGGACGCGGACCTGGAGAAGAC CCGCTACCGCTTCGAACTGGAGGACGGCAGCGTGGTGGAGCTGAAGGGCAACGAGGAGGTGGAGTACGACGGCGAGGTGCATACGGCGGCGAACCTGTAC GAGGCCCTCAAGGAGGGCTACTACGGGCGTTACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGGAGGCGGCGATGAGCGTGAAGATCAACCAGCGGATCAAGGGTTTCCAGGTGGTGGACGTGGAGGCCGAGCGCGCCCGCCGCGCCGCCGAGGAAGCGG CCGCCGTGGTGCAGATGGACGAGACCCTGCAGCGCCCGGAAACCCTGGTGGGGGCGACCTACAAGATCAAGTCGCCTCTGTCGGAGCACGCGCTGTACGT GACCATCAACGACATCGTCCTCAACCCCGGCACGCCCCACGAGCAGCGCCGGCCCTTCGAGATCTTCATCAACTCCAAGGGCATGGAGCACTTCCAATGG ATCGTCGCCCTCACCCGCATCATGTCGGCGGTGTTCCGCAAGGGCGGCGACTGCACCTTCCTGGTGGAGGAGCTGAGCGCGGTGTTCGACCCCCGTGGCG GCTACCTCAAGCGCGGCGGGCTGTACATGCCCTCCCTGGTGGCCGAGATCGGCGCCGTGCTGGAACGCCACCTGGTGGCCATCGGCCTGATGCAGGGCCC
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| Amino Acid Sequence |
>NrdJa
MTRTGSPAKTRLPLPLQAASEDIWDSKYRLRRRDGTPLDDTPDHSLQRVAQALAEVEPKDVEHWYERFLWALRQGALPAGRILSNAGAQAHKPATSTINC TVSGVIHDAMDDILGKVHEAGMTLKAGCGIGYEFSTLRPRGAFVSGAGAHTSGPLSFMDVYDRMCFTVSSAGGRRGAQMATFDIAHPDVREFIRAKREDG RLRQFNLSLLVTDAFMQAVEQDAEWPLVFPLHARELDEVDLDDPAQVLWRDWPIHAGYQVREDGRVACRIYGRLKARHLWDMVMASTYDYAEPGFILIDR VNALNNNWWCEAIRATNPCGEQPLPPYGSCLLGSIDLTRFVDDPFTDQARFDWERFREVVKVFTRLLDNVVEINGLPLAQQREEITGKRRHGMGFLGLGS ALALLGLRYGSPESCVFTEEVAREMALVGWQAALDLAKEKGPAPLLAQRFTVTEAMLRQRPEMAADGYKVGDSVPGSVLHARYSRYMQRIAEHAPELVAQ LAEVGARFTHHSSIAPTGTISLSLGNNASNGIEPSFAHVYSRNLIRPGRKTKQKVEVVSYELLAYRALVDPQAAPGADSAGHGLPEWFVTAEDITPAQHV DIQAAAQKWVDSSISKTANVPTDYPFEAFKDIYLYAWRQGLKGCTTFRFNPAAFQGVLVKDADLEKTRYRFELEDGSVVELKGNEEVEYDGEVHTAANLY EALKEGYYGRY
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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