Pseudomonas sp. FeS53a, SZ55_RS17430

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. FeS53a scaffold41.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTTCGAGAAGCTCAACGCCGCCGCCCTGGCTCAGCACCCCGGTGGCACCATCCACGAGACCGAACTGGAAGAAGAGTACGGCCGCTACGTCTACCAGGTG GAACTGCGTGACGCCAAGGGCGTGCAGTGGGACCTGGAGCTGGACGCCACCAACGGCCAGGTTCTGAAGAACCACCAGGACGACTGATGCGCCTGATCAT TCGCTACAGCGGCATCGTCGCCCTGGTCCTGGCCACCTGCACCCTGCAGGCCATGGCCCGCGACCTGGACCAGGACGAAGCCCTCAAGCTCCGCGAACGA GGGGTGATCATGCCCCTCGAACAACTCCTCGACCGCGCCCTGGGGCTCTACCCCGGGGCGCGCCTGCTGGAAGCGGAGCTGGAGGAAGAGGACGATATCT ACGTGTACGAAGTGGAACTGCTGACCACCGATGGCGTGGTCCGCGAGCTGGAACTGGATGCCCGCGACGGTCGCATCCTGAAGGACGAGGAAGACGACTG
DNA Sequence for Gene
>SZ55_RS17430
ATGCGCCTGTTGTTGGTGGAGGACCATGTCCCCCTGGCCGATGAACTCCTGGCCGGCCTGACCCGCCAGGGCTACGCCGTGGACTGGCTGGCCGACGGCC GCGACGCCGCCTACCAGGGCGCCAGCGAACCCTACGACCTGATCGTGCTGGACCTCGGCCTGCCGGGCCGACCCGGCCTCGAAGTGCTGCAGGAGTGGCG CGCCAATGGCCTCGCCACCCCCGTGCTGGTGCTCACCGCACGGGACTCCTGGGCCGAGCGCATCGAAGGCCTCAAGGCCGGTGCCGATGACTACCTGACC AAGCCGTTCCACCCCGAGGAGCTGGCCCTGCGCATCCAGTCCCTGCTGCGCCGCGCCAAGGGCCTGGCCAACCAGCCGCACCTGGAGGCCGCCGGCCTGC AGCTGGACGAGGCCCGCCAGTGCGTGCTGCGTGACGGCGAAGAGGTGACCCTGACCGCCGCCGAGTTCCGCCTGCTGCGCTACTTCATGCTCCACCCCGG GCAGTTGCTCTCCAAGAGCCACCTGGCCGAGCACCTCTACGACGGCGAGACCGAGCGCGACTCCAACGTCATCGAAGTCCACGTCAACCACCTGCGCCGC AAGCTCGGCCGCAGCGTCATCGAGACCCGGCGTGGCCAGGGCTACCGCTTCACCGGAGTCACCGGGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGTCCATCCAGCGCCAGCTTTCCCTCGGCCTGGTCGCCCTGCTGCTGGTGGTCGGGCTGCCCCTGGCCCAGCTCAGCCTGTGGCTGTTCGACGACGGCCT GCGGCGTTACCTGGAGAACAACTTGCGCAGCGAAGCGGAAGGCCTGCTCGCCGCCCTGGTGCGCGGTCCCAATGGCATCCAGTTGGACGAGCAGAAGCTC AACCCCGCCCATCAGCAGCCCTTCTCCGGGCGCTACTTCGTGATCCGCATCGACGACCGCCCCTGGCGCTCCCGCTCGCTCTGGGACAGCGAGCTGCAAC TGCCCGAGCGCGCCGGCCTGGCCGCCGACCTGCTGCCCGGCCCCCGCGAGCAGCGCCTGCTCACCTACCGGGGCGACTACCGGCGCTTTGGCCGCCAGGT GGTCATCGTCGTCGCCCAGGACTACACCCCCGTGCTGGAAGACTTCCGCCGTGTGCAATGGACCGGCGTCGCCCTCGGCCTGGCCGCGCTGCTGCTGATC
Amino Acid Sequence
>transcriptional regulator
MRLLLVEDHVPLADELLAGLTRQGYAVDWLADGRDAAYQGASEPYDLIVLDLGLPGRPGLEVLQEWRANGLATPVLVLTARDSWAERIEGLKAGADDYLT KPFHPEELALRIQSLLRRAKGLANQPHLEAAGLQLDEARQCVLRDGEEVTLTAAEFRLLRYFMLHPGQLLSKSHLAEHLYDGETERDSNVIEVHVNHLRR KLGRSVIETRRGQGYRFTGVTG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site