Pseudomonas sp. FeS53a, SZ55_RS26115
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. FeS53a scaffold40.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GAAGACCTGCTGCGCTGCAGTCGCGGTGAGCTGTTCGGACCTGGTAATGCGCAACTGCCCGCCCCCAACATGCTGATGATCGACCGGATCGTTCACATCA GCGAAACCGGCGGGAAGTACGGCAAGGGCGAAATCGTCGCCGAGCTCGATATCAACCCCGACCTGTGGTTCTTCGCCTGCCACTTCGAGGGCGACCCGGT GATGCCGGGCTGCCTGGGCCTCGATGCCATGTGGCAGCTGGTGGGCTTCTACCTCGGCTGGCAGGGCAACCCCGGCCGCGGCCGTGCACTGGGCTCGGGC GAGGTGAAATTCTTCGGTCAGATCCTGCCGACCGCCAAGAAGATCACCTACAACATCCAGATCAAGCGCACCATCAACCGCTCGCTGATCCTCGGCATCG CCGATGGCACCGTCAGCGTCGACGGGCGCGAGATCTACAGCGCGGAAGGCCTCCGCGTCGGCCTCTTCACTTCAACTGACAGCTTCTAAGGGTTATCCGC
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| DNA Sequence for Gene |
>SZ55_RS26115
ATGCGTCGCGTCGTGATCACCGGCCTGGGCATCGTTTCCTGCCTGGGCAATGACAAGGAAACCGTTTCCGCCAACCTGCGTGCCGGCCGTGCCGGTATCC GCCACAACCCGGCCTACGCCGAGATGGGCCTGCGCAGCCACGTTTCCGGTTCCGTCGACCTGAACCTGGAAGAGCTGATCGATCGCAAGATCTTCCGCTT CATGGGTGACGCCGCCGCCTACGCCTACCTGGCGATGGAACAGGCGATCAAGGACTCCGGCCTGACGCCCGAGCAGATCTCCAATCCCCGCACCGGCCTC ATCGCCGGTTCCGGTGGCGCCTCCACCGTCAACCAGATGGAAGCCATCGACACCCTCCGCGAGAAGGGCGTCAAGCGCATCGGCCCATACCGCGTGACCC GCACCATGGGCAGCACCGTTTCCGCGTGCCTGGCCACCCCCTTCCAGATCAAGGGCGTGAACTTCTCCATCTCCTCCGCCTGCGCCACCAGCGCGCACTG TATCGGCCAGGCCATGGAGCAGATCCAGCTCGGCAAGCAGGACGTGGTCTTCGCCGGCGGCGGCGAGGAAGAGCACTGGAGCCAGAGCTGCCTGTTCGAC GCCATGGGCGCCCTCTCCACCCAGTACAACGACACCCCCGAGAAGGCCTCCCGCGCCTACGACGCCAAGCGTGACGGCTTCGTCATCGCCGGTGGCGGCG GCATGGTGGTGGTCGAGGAACTGGAGCACGCCCTCAAGCGCGGCGCCAAGATCTACGCCGAGATCGTCGGCTACGGTGCCACCTCCGACGGCTACGACAT GGTCGCCCCGAGCGGCGAAGGCGCGGTCCGCTGCATGCAGCAGGCCCTGTCCACCGTCAAGGCCCCGATCGACTACCTCAACACCCACGGCACCTCCACC CCGGTGGGCGACGTGGCGGAGATCCGCGGCGTACGTGAAGTCTTCGGCGACAAGGCCCCGGTAATCAGCTCCACCAAGAGCCTGTCCGGCCACAGCCTGG GTGCCGCCGGCGTCCACGAGGCGATCTACTGCCTGCTGATGATGGAAGGCAACTTCATCGCTGCCTCGGCCAACATCGACGAGCTGGACCCGGAAGTGGC CGACATGCCGATCCTTCGCCAGGTTCGCGAAGACGCCAAGCTGGACACCGTCATGTCCAACAGCTTCGGCTTCGGCGGCACCAACGCCACCCTGGTGCTG CAGCGCTTCAAGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCGGCCCCCGGCAACACCTGAAGGCCCGTATCCCCGGATACGGGCCTTTTTCATGCCCTGCGTAAAACCGCATCAGACCTTTCCCAAACCCCGCCGCCGC ATTTAAGTCCCGCGCAACGCCTCCGCTCTTAATGCCCGTACGCCCACGCGCATCCCCGGAGGAGCCTCCCATGTCCCTGCGCAACCTGAGCATTTCCATC CGCGCCGCCTGCGGCTTCGCCGTCATCACCCTGTTGCTGGTGGGCCTGGGGCTCTTCTGCCTGTCGCGGATGTCCACCATGGACGAAGCCGCCTACCAGG TATCCAAGATCTGGCTCCCCAGCGTCGAGTACTCCAGCCAGCTCGGCTACCTGATGGCCGAATACCGTCTCAGCGAGATGAACCACATTCTCAGCCGCGA GGCCGAGCAGATGAGCCGCCAGGAAGCGCGCATGGCCAAGATCCGCGAGGAGCTGGACGAGATCGAGCGCATCTACCAGCCCCTGTTCCTGTTGCCGGAC
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| Amino Acid Sequence |
>3-oxoacyl-ACP synthase
MRRVVITGLGIVSCLGNDKETVSANLRAGRAGIRHNPAYAEMGLRSHVSGSVDLNLEELIDRKIFRFMGDAAAYAYLAMEQAIKDSGLTPEQISNPRTGL IAGSGGASTVNQMEAIDTLREKGVKRIGPYRVTRTMGSTVSACLATPFQIKGVNFSISSACATSAHCIGQAMEQIQLGKQDVVFAGGGEEEHWSQSCLFD AMGALSTQYNDTPEKASRAYDAKRDGFVIAGGGGMVVVEELEHALKRGAKIYAEIVGYGATSDGYDMVAPSGEGAVRCMQQALSTVKAPIDYLNTHGTST PVGDVAEIRGVREVFGDKAPVISSTKSLSGHSLGAAGVHEAIYCLLMMEGNFIAASANIDELDPEVADMPILRQVREDAKLDTVMSNSFGFGGTNATLVL QRFKA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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