Pseudomonas sp. FeS53a, SZ55_RS11670

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. FeS53a scaffold39.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCGTAGCCGGTGGCGGTGTAGAAGGCCGGGATGCCGGCGCCACCGGCGCGCAGCTTCTCGGCCAGGGTGCCCTGGGGCGTGAGTTCCACCTCCAGCTCAC CGGAGAGCAGCTGCTGCTCGAACAGCGCGTTCTCGCCCACGTAGGAGGCGATCATCTTGCGGATCTGCCGGTCCTCCAGCAGCACGCCCAGGCCGAAGCC ATCGACGCCGCAGTTGTTGGAGACCACGGTGAGGTCACGCACCCCGCGCCGCCGGATTTCGGCGATCAGGTTCTCCGGAATGCCGCAGAGGCCGAAGCCC CCGGCCAGGACGGTCATGCCATCGGTGAGCCCGTCGAGGGCTTCCGCGTAACTGCCTACACGCTTGTCGAGTCCGCTCATCGCTGATCCTCTGTTGTTGT TCTGCCTGGCCAGCCGGCCGGTGAGTGGGATGCAGCTTCTCGCGCACGGACTCATTTGTTAATTTTGTTTTTCCTCAGCATTGATCCGAAATCCTGATAA
DNA Sequence for Gene
>SZ55_RS11670
ATGACCGTCAAGCAACTGCGTGCCTTCCTCGCCGTCGCCCAGAGCCTGAGCTTCGCCCAGGCCTGCGAACGCCTGCACCTGTCCCAGCCAGCCCTGTCCC TGGCGATCAAGACCCTGGAGGAATCCCTCGGCGGGCAGTTACTGGTGCGCACCACCCGCAGCGTCGCCCTCACACCCGAGGGCGAGACCCTGCTGCCCAT CGCCCGGCGCCTGCTGGCCGACTGGGACGACGCCGAAGAGCTGCTGCACCAGCACTTCACCCTGCAACTGGGCAAGGTCGCCATCGCCGCCATGCCCTCC TTCGCCAGCAACCTGCTGCCGGTGGCGCTGAAAGCGTTCCGCGACCGCCACCCGAAGGTGAACGTCGCCGTGCACGACGTGATCAACGAACAGGTACTGG AAATGGTGCGCAGCCACCGCGTGGAACTGGGCATCGCCTTCGAGCCGTCGAGCCTGGAAGGCCTGGCCTTCACACCCTTCTACAGCGACCGCTTCGTCGC CGTGGTGCCGGCCGGCTGCGCGCTGGCCGAACGCGACACGGTGAGCTGGGCGGAGCTGCTGGGCGAGCCCTTCATCACCCTGCAACGCCCCTCGGCCGTG CGCCTGCTGCTGGAAGACAGCGTCGCCGCCCGCCACGGCCACCTGCCCGTCGCCTTCGAAAGCCACCAACTGGTCACCGTCGGCCGCATGGTCGCCCAGG GCCTGGGCGTCAGCGCCGTCCCCAGCCTGTGCATCCAGCAGATGGAAGAACTGGGCGCCCGCTGCGTCCCCCTCGACACCCCGCAAGTGGAACGCCGCGT CGGCCTGCTGCGCCTCTCCAGCCACCAACTCTCCACCGCCGCCCAGGCCCTGGCCGACGTGCTGCTGCACCTGCGCGATTGGGAGCACCAGCTAACCCCA GCGCGCCGAGCGCGCTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGCAGAAGAGCTGTTTCGGTACTCACAAGGTAAGCGGGCGTACGCCCTATTCCCCGTTCAACAACGCCTTCCCGTCCACACCCTCGCCGATCACCAGGTA ATGCCCGCCGGCGACGTGGTGGAGGGTGCGCAGGTCGTCCTGGCCGTCGAAATGCCAGCGGCCTTCGCTGAATACCCGGCTGTCGGCCTGGGCGGCGATG ACTTCACCGAGGAAGAGGTCGTAGCCCTGCTGAATGTGCGCCTCGGGCAGCAGGCGGCATTCCAGCCAGGCGACGCACCCGTCGATCAGCGGCGCAGCAA CCTGTTCGCCCGGGAAGTGCCCGACCTGCCAGGTGGCGAACTTGTCGTGCCCGGCGGCGTCCAGTTCCTGGCCCGAGCTGGAGCCGAGGGTCTGCACCAG GTCCACCTGGTGGCGGGCCGGCACGCTGAGCACGAAATGGCCGTCGGCCTCCAGCAGGCGCCGGGTCCAGGTGGACTTGTCCAGCACCACGGCCACCTTC
Amino Acid Sequence
>LysR family transcriptional regulator
MTVKQLRAFLAVAQSLSFAQACERLHLSQPALSLAIKTLEESLGGQLLVRTTRSVALTPEGETLLPIARRLLADWDDAEELLHQHFTLQLGKVAIAAMPS FASNLLPVALKAFRDRHPKVNVAVHDVINEQVLEMVRSHRVELGIAFEPSSLEGLAFTPFYSDRFVAVVPAGCALAERDTVSWAELLGEPFITLQRPSAV RLLLEDSVAARHGHLPVAFESHQLVTVGRMVAQGLGVSAVPSLCIQQMEELGARCVPLDTPQVERRVGLLRLSSHQLSTAAQALADVLLHLRDWEHQLTP ARRAR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site