Pseudomonas sp. FeS53a, SZ55_RS05995
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
|
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF07715 | TonB-dependent Receptor Plug Domain | IPR012910 | TonB-dependent receptor, plug domain | 51 | 171 | 7.9E-24 |
| CDD | cd01347 | ligand_gated_channel | - | - | 56 | 799 | 3.41531E-64 |
| PANTHER | PTHR47234 | - | - | - | 6 | 820 | 0.0 |
| Gene3D | G3DSA:2.40.170.20 | - | IPR036942 | TonB-dependent receptor-like, beta-barrel domain superfamily | 255 | 820 | 5.4E-57 |
| Pfam | PF00593 | TonB dependent receptor | IPR000531 | TonB-dependent receptor-like, beta-barrel | 308 | 814 | 4.9E-39 |
| SUPERFAMILY | SSF56935 | Porins | - | - | 36 | 799 | 7.69E-100 |
| Gene3D | G3DSA:2.170.130.10 | - | IPR037066 | TonB-dependent receptor, plug domain superfamily | 26 | 181 | 8.9E-33 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.