Pseudomonas sp. FeS53a, SZ55_RS05055

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. FeS53a scaffold23.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGGGCGTAGAGCTGGGCGCCGCCGATCAGCATCACTTCCTCGGCGTCCTCCTCGCGGGCCCACACCTCGGCGCGGGCCACGGCCTCTTCCAGGCTGGCGA ACACCTCGGCGCCCTCCAGCTGCAGGCCGGCCTGGCGGCTGACCACCAGGTTCAGGCGCCCCGGCAGCGGGCGGCCCAGGGAGTCCCAGGTCTTGCGGCC CATGATGATGGGCTTGCCCAGGGTCAGGGCCTTGAAGTGCTTGAGGTCCGCCGGCAGGTGCCAGGGCAGTTGGTTGTCGCGGCCGATGACCCGGTTGCGG GCCTGGGCGGCGATGAGGGCGAGGGGGAGGGTCTTTTTCATGGCGGCGAGAATACCAGAGGCCATGGCCACCGCCAGCCGGCCTTTCCTTCTGTCGCCGC CAACGGTGTCACGCCCGGCAACACATGCCCGGGCGGCGCACGACAAACCGTCATCTATCCTGCCGCAGGCTTGCGCTTCCCTACCGCAAGGAGACGCCCC
DNA Sequence for Gene
>SZ55_RS05055
ATGGCATCCACCCCGACCCTGCGGCATTGGCTGGCGGCCTGCAGCCTGACGTTGCCCCTCTGCACCTTCGCCGCACCGGACCCGGTGCAATCCGCCCTCG ACTGGGCCACCCAGCAGCCCCAGGCCAGTCGCGCCCCGGCGCGCGCCGAGGGCCAGCCCCTGGTGATCGGCCATCGCGGCGCCAGCGGCTACGTGCCGGA GCACACCCTGGCGTCCTACGCCCTGGCCGCCCTGCAAGGCGCCGACTATGTTGAGCCGGACCTGGTGATGACCCGCGACGGCCACCTGGTGGCCCGCCAC GACAACGAGCTGGGGCTGACCACCGACGTCAGCCGCCACCCCGAGTTCGCCGACCGCAAGCGCACCCAGAGCGTCGACGGCGTGCCGCTCACCGGCTGGT TCAGCGAGGATTTCACCCTGGCCGAGCTGAAGACCCTGCGCGCCATCGAGCGCATCCCCCAGGTGCGCCCCGGCAATGCGCGCCTGGACGGCGCCTTCGA GATCCCCACCCTGCAGGAGATCATCGACCTGGTGAAAAGCCTCCAGCTCAGCCAGCAGCGCCGCATCGGCCTGTACATCGAGACCAAGCACCCCACCCAC TTCCAGCAGCTCGGCCTGGCCATGGAGAAGCCGCTGCTGCGCACCCTGCAACACAACGGCTACACCGACCGCCGCGCGCCGGTGTACATCCAGTCCTTCG AGGTGGACAACCTGCAGCGCATCGCCCGGCAGAGCAGCCTGCGCCTGGTGCAGCTGTACGGCAGCGGCCAGCCCTATGACCAGCAGGTGCTGGGCACCGG CCTGACCTATGCGCGGATGGCCAGCCCCGACGGCCTGCGCGCCGTCGCCCGCTACGCCGCCGGGGTCGGGCCGGAGAAGGGCTACATAATTCCCCGCGAT GCCGCCGGCAACCTGGGCCAGCCCACCCGCTTCGTCGCCGACGCCCATGCGGCGGGCCTCAAGGTGCACCCCTACACCTTCCGCGCGGAGAACGCCTTCC TGCCCACCAACCTGCGCCAGGGCAGCGACCCGCAGGCACGGGGCGACATCCAGGCGGAGATCCGCGCCTTCCTCGACGCCGGCATCGACGGGCTGTTCAT CGACCAGCCGGACCTGGCCGTGCAGGTCCGCGACGCGCGCGCGGCGCCGTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGCGCCCCCCGGCGGGCGGTCCACCGGCCGCCCGCTGCACCACCCCTGGCGTCAGCGGTTATGCTTCTGCCTCGTCCCATGGGAAGAGAAGCCGCGTGAC CGACTCCGCGAACCCCACCCTCACCGATCTGCAACGCCTCTGGCTCACCGAAGCGATCCGCCTGCGCGAAGAGCACGCCGGCCCGCTGGAGGACAGCGAA GCCAACCGCCGCGCCAACGCCGGCGGGGGCGACCTCGCCCAGCGCATCCAGGCCCGTGCGCTGTTCCTCGCCCAGCGCGACGGCCAGCTCGGCGCCCTCG TCCACTGGCTGCAAGGCGCCCGCCTGGCGGCCTGGGCCCTGGTGCTGCTGGCCCTGGCCAGCGGCGCCACCCTGGCAGCAGCCGCCCTGGGCGACGGGCA GCGCCCGGTCAACGTGTTCTGGGCCCTGGGCGGGCTGCTCGGCCTGCACCTGCTGACCCTGCTGGGCTGGACCCTCGGCCTCCTGGCCGGCGGCCACGCC
Amino Acid Sequence
>glycerophosphodiester phosphodiesterase
MASTPTLRHWLAACSLTLPLCTFAAPDPVQSALDWATQQPQASRAPARAEGQPLVIGHRGASGYVPEHTLASYALAALQGADYVEPDLVMTRDGHLVARH DNELGLTTDVSRHPEFADRKRTQSVDGVPLTGWFSEDFTLAELKTLRAIERIPQVRPGNARLDGAFEIPTLQEIIDLVKSLQLSQQRRIGLYIETKHPTH FQQLGLAMEKPLLRTLQHNGYTDRRAPVYIQSFEVDNLQRIARQSSLRLVQLYGSGQPYDQQVLGTGLTYARMASPDGLRAVARYAAGVGPEKGYIIPRD AAGNLGQPTRFVADAHAAGLKVHPYTFRAENAFLPTNLRQGSDPQARGDIQAEIRAFLDAGIDGLFIDQPDLAVQVRDARAAP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site