Pseudomonas sp. FeS53a, SZ55_RS02295

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. FeS53a scaffold22.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTCCAACCGCGCCCATCCGGGTACAGCCCGGGGTGCTTTCACCTGTACAAGGAGTTTCCATGAGCAAGACCGTGATCAACAGCGACAAGGCTCCCGCCGC CATCGGCACCTACTCCCAGGCGATCAAGGCCGGCAACACCGTCTACATGTCCGGGCAGATCCCCCTCGATCCCAAGACCATGGAGCTGGTGGAAGGCTTC GAAGCCCAGACCGTCCAGGTGTTCGAGAACCTGAAGGCCGTCGCCGAAGCCGCCGGTGGCTCCTTCAAGGACATCGTCAAACTCAACATCTTCCTCACCG ACCTGTCCCACTTCGCCAAGGTCAACGAAGTGATGGGCCGCTACTTCGAGCAGCCCTATCCGGCCCGCGCCGCCATCGGCGTGGCCGCGCTGCCCCGTGG CTCTCAGGTCGAGATGGACGCCATCCTGGTCCTCGAGTAAACCCGATGGCCGCAGCGGGCACCTTGCCCGCTGCACCCGGCCAAAGGAAGGAACCCCGCC
DNA Sequence for Gene
>SZ55_RS02295
ATGCGCCAAGCCCTCATCCCCCTCATCTGCGCCGCCCTGCTGGCCGGTTGTGCCGGCACGCCCAGCGACCCCAGCGGCGTCTGGATCAACCAGACCGCCA TCGACGAAGCCGCCCGTGAAGGCAAGTTGCGCGAGGCCCTGCTCGCCTACGGCCCCAACCTGGAGTGGAGCCTCGACACCCACGCCGGGACCGCCAACTA CAGCAACGGCTTCGAACTGGGCGAGGGCCGCCTGGTCCCCCAGGGCAAGGGCCGCTGGCAAGTGGACTTCTACGGCGACGACTACCACGAGCACCTGAAC CTCAAGGGGCGCCAGCTGATCCAGGAAGCCAGCGAGAACTTCCCCGAACAGCACTTCGTACGCCCAGCCGAACCCGCCGCCGACGGCGCACCGGAAGGCA GCAGCTTCGAATACGCCCTCTACAAGACCTACCTCGGCGGCACCTGGAAGATCCTCGAAGGCACGGGGCAGGGCGGCCTGGTGCTGTTCCACCCCGACGG TCGCCTGGAAGGGCTGCCCGGCGCCGACCGCTTCGCCCTCTGCCTGGCCGGCGACTGTGCCGCCATGAGCGGCGAGAACGACAGCATGTGGCTGCAACTC GGCGACCAGGGCGCGCCCTGGATCTTCGTCCACGACGGCAACCGCCTGGAAATCCTCGAGACCGGCAACCGCGCCCAGATCGATGAGATGCCCGAGTACT ACCCCGGCAAGCGCGCTTGGGTACTGGAGCGCCAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGCCAGGCCGCCGTTAAAAGGCCCCGACCACCAGCCAGCCCCCCAGCAACGCCAGCAACCCGCCACACAGCCGATCCAGCACCACCACCCGCCGTTGCAG CCAGGCCTGCCAGCGGCGGTGTGACACCAGGCGCACCAGCCCCAGGTCCCAACCCAGCACCACCAGGGTCATCCAGGCCATGCACAGGGCCAGGCCCCAG TCGGGCATCTGCGCCGAGCGCAGCACCCCGAACAGCCCGGCATAGAAGATCGGCAACTTCGGATTGACGCTGCTGGCCAGCAACCCTTCCAGCACACCCC TTCGCCAGGAGCCAAGGCCCGCATCAGCGCTGGCTTCGGGCAGGTCGAGCCGGCGCCGCGCCATCAAGGCCTGAGCGCCCAGCCACAGGAAGTAGCCCCC ACCCAGCAGTTGCAGGGCGCGCCACACCCAGCCGCCCTCCGCAGGCAGCAGGCTCAGCGCCAGCAATACCAGCAACATGCTCGCCAGGTTCGCCAACGCG
Amino Acid Sequence
>lipoprotein
MRQALIPLICAALLAGCAGTPSDPSGVWINQTAIDEAAREGKLREALLAYGPNLEWSLDTHAGTANYSNGFELGEGRLVPQGKGRWQVDFYGDDYHEHLN LKGRQLIQEASENFPEQHFVRPAEPAADGAPEGSSFEYALYKTYLGGTWKILEGTGQGGLVLFHPDGRLEGLPGADRFALCLAGDCAAMSGENDSMWLQL GDQGAPWIFVHDGNRLEILETGNRAQIDEMPEYYPGKRAWVLERQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site