Pseudomonas sp. FeS53a, SZ55_RS07320

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. FeS53a scaffold21.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GAGCATCGCCGCCAGGGTGGTGGACTTGCCCGAACCGGTGGGGCCGGTGACCAGCACCAGGCCGCGGGGAACGTCGGAGATCTTCTTGAAGATCTCGCCC ATGCCCAGGTCCTCCATGGACAGCACCTTGGAGGGAATGGTCCGGAACACGGCGCCGGCGCCGCGGTTCTGGTTGAAGGCGTTGACCCGGAAGCGGGCCA CGCCGGGCACCTCGAACGAGAAGTCGGTTTCGAGGAATTCCTCGTAATCCTTGCGCTGCTTGTCGTTCATGATGTCGTAGATCAGCGCGTGCACCTGCTT GTGGTCCAGGGGGGGCAGGTTGATACGGCGAACATCGCCGTCGACGCGGATCATGGGCGGCAGCCCGGCCGAGAGATGCAGGTCCGAAGCGCCCTGCTTG GCGCTGAACGCAAGCAGCTCAGTAATATCCATGGGACTCCCCAATTCCAAGCGGTTAGAATGCCGCAGACCCACTCAGGCCGGGCTGTAGAGCGCAGTTA
DNA Sequence for Gene
>SZ55_RS07320
ATGTCCACGATAGCAAAGAATATTGCAAAGGTTCGCGCGCGTATCCGTGAGGCGGCGCAAGCCTCTGGAAGGGATTCATCCACCATCGGCCTGCTGGCCG TGAGCAAGACCAAACCCGCCGACGCCATTCGCGAGGCCCACGCCCAGGGTGTGGCCGATTTCGGCGAGAACTACCTCCAGGAAGCGCTGGCCAAGCAGGC CGAACTCACCGACCTGCCGCTGACCTGGCATTTCATCGGCCCGATCCAGTCGAACAAGACCAAGCCCATCGCCGAGCACTTCCACTGGGTGCACTCGGTG GACCGGCTGAAGATCGCCGAGCGCCTTTCCGCCCAGCGCCCTGCCCACCTGGCGCCGCTGAACATCTGCCTGCAGGTCAACGTCAGCGGCGAAGCCAGCA AGTCGGGCTGTGCACCGGAAGACCTCCCGGCCCTGGCCAAGGCCGTGGCCGGCCTGCCGAACCTGCGCCTGCGCGGGCTGATGGCGATTCCCGAGCCCAC CGACGACGTCGCAGCCCAGCACGCTGCCTTCGCCCGCCTGCGCCAGTTGATGACCGACCTGGACCTCGCCCTCGACACCCTGTCCATGGGCATGAGCCAC GACCTCGAAGCGGCGATCGCCGAAGGCGCCACCTGGGTGCGCATCGGTACCGCCCTGTTCGGCGCCCGCGACTACGGGCAGCCGGCCCCCTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TAAGGAAGGAACACGACATGAGCACTCCCCGCATTGCATTCATCGGCGCCGGCAACATGGCCGCCAGCCTGATCGGTGGCCTGCGCGCCCAGGGCGTTCC GGCCGACCACATCCGCGCCAGCGACCCTGGCGCCGAGCAGCGCGCCCGCATCGCCGCCGAGCACGGCATCGAGGTGGTCGAGAGCAACGCCGACGCCGTG CGCGGCGCCGATGTGGTGGTCCTGGCCACCAAGCCCCAGGTCATGAAGGCCGTGTGCGAAGCGCTGGCCCCGAGCCTGTCCGCTGGCCAGCTGGTCGTGT CCATCGCCGCCGGCATCCCCTGCGCCAGCCTGGCCCGCTGGCTGGGCGTCGACTCCATCGTGCGCTGCATGCCCAACACCCCGGCCCTGCTGGGCGAAGG CGCCAGCGGCCTGTACGCCACCGCCGCCGTCAGCGATGAGCAGCGCCGCCAGGCCGAGCAGCTGCTGCAAGCCGTGGGCATCGCCCTGTGGCTCGACGAG
Amino Acid Sequence
>hypothetical protein
MSTIAKNIAKVRARIREAAQASGRDSSTIGLLAVSKTKPADAIREAHAQGVADFGENYLQEALAKQAELTDLPLTWHFIGPIQSNKTKPIAEHFHWVHSV DRLKIAERLSAQRPAHLAPLNICLQVNVSGEASKSGCAPEDLPALAKAVAGLPNLRLRGLMAIPEPTDDVAAQHAAFARLRQLMTDLDLALDTLSMGMSH DLEAAIAEGATWVRIGTALFGARDYGQPAP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site