Pseudomonas sp. FeS53a, SZ55_RS07230

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.20.120.160
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01584
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004673 protein histidine kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 840 936 1.09401E-7
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 2167 2353 8.4E-53
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1151 1277 4.1E-15
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 7 130 6.02E-22
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1706 1839 1.3E-26
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1370 1497 2.2E-28
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1713 1834 1.57E-25
SMART SM00260 chew_2 IPR002545 CheW-like domain 2346 2490 4.0E-31
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 2314 2332 3.7E-10
Gene3D G3DSA:2.30.30.40 SH3 Domains - - 2428 2488 3.6E-19
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 2520 2633 6.1E-38
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1010 1099 6.2E-11
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1372 1466 1.3E-13
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 2217 2353 5.1E-14
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1713 1810 0.0028
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 10 99 7.9E-8
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 2170 2351 1.1E-36
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1008 1099 6.91535E-6
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 842 919 1.9E-12
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 840 937 2.0E-5
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 433 556 7.46E-15
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 2519 2638 5.98E-38
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1001 1133 8.2E-16
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1008 1111 0.078
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 2338 2351 3.7E-10
Coils Coil Coil - - 1952 1972 -
SUPERFAMILY SSF50341 CheW-like IPR036061 CheW-like domain superfamily 2353 2486 7.98E-23
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1370 1492 4.06E-27
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1861 1987 3.0E-23
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1713 1811 3.68585E-14
Coils Coil Coil - - 1601 1635 -
CDD cd16916 HATPase_CheA-like - - 2176 2351 1.65626E-81
SMART SM01231 H_kinase_dim_2 IPR004105 Histidine kinase CheA-like, homodimeric domain 2029 2168 5.9E-11
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1150 1272 1.41E-16
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 840 976 3.1E-28
Coils Coil Coil - - 2067 2087 -
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1008 1129 2.88E-17
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1862 1963 4.5E-7
CDD cd17546 REC_hyHK_CKI1_RcsC-like - - 2522 2633 4.09197E-32
MobiDBLite mobidb-lite consensus disorder prediction - - 1596 1656 -
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 2522 2633 1.1E-27
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 840 964 1.7E-26
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 14 136 3.2E-10
Pfam PF01584 CheW-like domain IPR002545 CheW-like domain 2359 2491 1.0E-21
Coils Coil Coil - - 1870 1890 -
MobiDBLite mobidb-lite consensus disorder prediction - - 962 1005 -
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1864 1964 3.0E-13
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 2213 2354 2.2E-22
FunFam G3DSA:3.30.565.10:FF:000016 Chemotaxis protein CheA, putative - - 2169 2353 1.2E-60
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1370 1468 1.67465E-14
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 2258 2272 3.7E-10
Gene3D G3DSA:3.40.50.2300 - - - 2522 2641 7.0E-41
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1715 1814 1.1E-14
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1864 1971 2.09E-20
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1863 1967 1.69037E-11
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1370 1467 1.4E-7
PANTHER PTHR43395 SENSOR HISTIDINE KINASE CHEA - - 1956 2639 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.