Pseudomonas sp. FeS53a, SZ55_RS00145

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0015232 heme transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01785
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01786
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0019867 outer membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07660
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01786
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015886 heme transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01785
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR30069 TONB-DEPENDENT OUTER MEMBRANE RECEPTOR IPR039426 TonB-dependent receptor-like 52 859 1.0E-111
NCBIfam TIGR01786 JCVI: TonB-dependent hemoglobin/transferrin/lactoferrin family receptor IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor 138 858 0.0
SMART SM00965 STN_2 IPR011662 Secretin/TonB, short N-terminal domain 74 125 5.8E-12
CDD cd01347 ligand_gated_channel - - 154 860 6.07477E-97
MobiDBLite mobidb-lite consensus disorder prediction - - 315 335 -
Gene3D G3DSA:2.170.130.10 - IPR037066 TonB-dependent receptor, plug domain superfamily 147 273 4.1E-33
Pfam PF07660 Secretin and TonB N terminus short domain IPR011662 Secretin/TonB, short N-terminal domain 75 122 1.1E-9
Gene3D G3DSA:3.55.50.30 - - - 47 146 4.1E-23
Pfam PF07715 TonB-dependent Receptor Plug Domain IPR012910 TonB-dependent receptor, plug domain 149 258 2.4E-26
SUPERFAMILY SSF56935 Porins - - 138 857 1.65E-120
NCBIfam TIGR01785 JCVI: TonB-dependent heme/hemoglobin receptor family protein IPR011276 TonB-dependent haem/haemoglobin receptor 135 857 2.0E-127
Gene3D G3DSA:2.40.170.20 - IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily 274 860 3.4E-129
Pfam PF00593 TonB dependent receptor IPR000531 TonB-dependent receptor-like, beta-barrel 350 858 4.1E-63

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.