Pseudomonas sp. FeS53a, SZ55_RS00020

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. FeS53a scaffold2.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGGCGTCGCGCCACGGGTCATGGGCATCGGCCCGGTGCCGGCGGTGCGCAAGCTGCTGGAGCGCCTGAACCTGGGCATCGACCAGTTCGACGTCATCGAA CTCAACGAAGCCTTCGCCGCCCAGGGGCTGGCCGTGATGCGCGAGCTGGGCCTCCTCGACGACAGCGAGAAGGTCAACCCCAACGGCGGTGCCATCGCCC TCGGCCACCCCCTGGGTGCCAGCGGCGCGCGCCTGGTACAGACCGCCTTGCACCAGCTGGAGAAGTCCGGCGGCAAGCGCGGCCTGGCCACCATGTGCGT AGGGGTAGGGCAGGGCCTAGCCCTGGCCATCGAGCGCGTCCAGCAGGCGAAGTGACGCAGGGTGGGCTTCAGCCCACCACGACTGCGACCCAGCACGGTC GAGTGGGCTGAGGCCCAACTGAAGCCCACTCGACAGACTGGATTCACTCCCATCGCCCTGCCAACCTAGGCCCACCCCCAACCGCTGCAACGAGGTCGCC
DNA Sequence for Gene
>SZ55_RS00020
TTGAGCAACCAACTCTTCGACGCCTACTTCACCGCCCCGGCCATGCGCGCGATCTTCTGCGACCAGGGCCGGGTGCAGGGCATGCTCGACTTCGAGGCCG CCCTGGCCCGTGCCGAGGCCCGCGTGGGGCTGATCCCCCGAGAGGCCGTCGCACCCATCGAAGCCGCCTGCCGGGCCGATTTCTACGACTTCTCCGCCCT GGCCCAGGCCATCGCCACCGCCGGCAACTCCGCCATCCCCCTGGTCAAGGCCCTGGGCAAGCGCATCGCAGCGGCCAGCCCGGAGGCCGAGCGCTATGTG CATCTGGGCGCCACCAGCCAGGACGCCATGGACAGCGGCCTGGTGCTGCAACTGCGTGCTGCCATCGGCCTGATCGAAGCCGACCTCGCGGCCCTGGGCG ACGCCCTTGCCGAGCAGGCCGAGCGCCACGCCGACACCCCGCTGGCCGGCCGCACCTGGCTGCAGCAGGCCACCCCGGTGACCCTCGGCATGAAGCTCGC CGGCCTGCTGGGCGCCGTCACCCGCCATCGCCAGCGCCTGGCGGAACTCAAGCCGCGCCTGCTGTGCCTGCAGTTCGGTGGCGCCTCCGGCAGCCTCGCC GCCCTCGGCGAACAGGCCTGGCCGGTGGCCGAAGCGCTGGCCGTCGAGCTGTCGCTGAACCTGCCGGACCAGCCCTGGCACACCCAGCGTGACCGCCTGG TGGAGTTCGCCAGCCTGCTGGGCCTGGTCGCCGGCACCCTGGGCAAGCTGGGGCGCGACCTCAGCCTGCTGATGCAGACCGAGGCCGGCGAACTCTTCGA GCCCGCCGCGCCCGGCAAGGGCGGCTCCTCGACCATGCCCCACAAGCGCAACCCGGTGAGCGCCGCCGTGCTCATCGGCGCCGCCACCCGTGCACCGGGC CTGGTGGCCACCCTGTTCGCCGCCATGCCCCAGGAGCACGAGCGCAGCCTCGGCCTCTGGCACGCCGAATGGGAAAGCCTGCCGGAGCTCTGCTGCCTGG TGTCCGGTGCCCTGCAGCACGCGCTGCTGCTGGTGCCCGGCCTGGAGGTGGACGCCGCGCGCATGCGCCGCAACCTCGACCTAACCCAGGGCCTGGTGCT GGCCGAGGCGGTGAGCATCGCCCTGGCCCAGCGCATCGGCCGCGATGCCGCCCACAATCGGGTGGAGCAGTGCTGCCGCCAGGCGGTGAAGGAGGGCGCC CACCTGCGCGCCGTGCTCGGTGCCTGCGCCGAGGTCACCGCCGAGCTGTCCGCCGCCGAGCTGGACCGCCTGCTCGACCCCGCCCATTACCTCGGGCAGG CCCGCCGCTGGGTGGACCGTGCCCTCGCTGAACACACCACTTTCCCGCGCTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GAGTTTTCCATGCCTGCCGTACGTCTCGCCGATGGCGACCTGAACTACCTCCTCGAAGGCCCGGCCGGAGCGCCGGTGCTGGTGCTGTCCAACTCCCTGG GCACCGACCTGCACATGTGGGACGCCCAGGTCCCGGCCTTCACCCGGCACTTCCGGGTGCTGCGCTACGACACCCGAGGCCATGGCCAGTCCCTGGTCAG CGAAGGCCCCTATCGCATCGATCAGCTCGGCCGCGACGTGCTGGCCCTGCTGGATGCCCTGGACATTCCCAAGGCGCATTTCTGCGGCCTGTCCATGGGC GGGCTGATCGGCCAGTGGCTGGCCATCAATGCCCCCGAGCGCATCCAGCGCCTGGTGCTGTGTAACACCGCCGCCAAGATCGGCACCCCCGAGGTGTGGA ACCCGCGCATCGACGCCGTGCTGGCGGGCGGGGCCCAGGCCATGGCCGATCTGCGCGACGCCTCCATTTCCCGCTGGTTCACCCCGGACTTCGCCAAGGC
Amino Acid Sequence
>3-carboxy-cis,cis-muconate cycloisomerase
MSNQLFDAYFTAPAMRAIFCDQGRVQGMLDFEAALARAEARVGLIPREAVAPIEAACRADFYDFSALAQAIATAGNSAIPLVKALGKRIAAASPEAERYV HLGATSQDAMDSGLVLQLRAAIGLIEADLAALGDALAEQAERHADTPLAGRTWLQQATPVTLGMKLAGLLGAVTRHRQRLAELKPRLLCLQFGGASGSLA ALGEQAWPVAEALAVELSLNLPDQPWHTQRDRLVEFASLLGLVAGTLGKLGRDLSLLMQTEAGELFEPAAPGKGGSSTMPHKRNPVSAAVLIGAATRAPG LVATLFAAMPQEHERSLGLWHAEWESLPELCCLVSGALQHALLLVPGLEVDAARMRRNLDLTQGLVLAEAVSIALAQRIGRDAAHNRVEQCCRQAVKEGA HLRAVLGACAEVTAELSAAELDRLLDPAHYLGQARRWVDRALAEHTTFPR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site