Pseudomonas sp. FeS53a, SZ55_RS03910

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0005509	calcium ion binding	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF103647	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0016020	membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:PR01021	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
CDD	cd07185	OmpA_C-like	IPR006665	OmpA-like domain	237	343	2.32595E-48
Gene3D	G3DSA:3.30.1330.60	-	IPR036737	OmpA-like domain superfamily	218	347	1.9E-41
Gene3D	G3DSA:2.40.160.20	-	-	-	14	179	9.1E-50
PANTHER	PTHR30329	STATOR ELEMENT OF FLAGELLAR MOTOR COMPLEX	-	-	233	341	1.7E-32
Pfam	PF05736	OprF membrane domain	IPR008722	Outer membrane porin F, N-terminal	1	182	2.2E-86
PRINTS	PR01021	OMPA domain signature	IPR006664	Outer membrane protein, bacterial	242	264	3.7E-18
SUPERFAMILY	SSF56925	OMPA-like	IPR011250	Outer membrane protein/outer membrane enzyme PagP, beta-barrel	38	184	1.23E-17
PRINTS	PR01021	OMPA domain signature	IPR006664	Outer membrane protein, bacterial	272	287	3.7E-18
SUPERFAMILY	SSF103088	OmpA-like	IPR036737	OmpA-like domain superfamily	233	343	1.57E-39
Pfam	PF00691	OmpA family	IPR006665	OmpA-like domain	242	337	1.4E-23
SUPERFAMILY	SSF103647	TSP type-3 repeat	IPR028974	TSP type-3 repeat	196	229	4.84E-8
PRINTS	PR01021	OMPA domain signature	IPR006664	Outer membrane protein, bacterial	287	303	3.7E-18
FunFam	G3DSA:3.30.1330.60:FF:000005	Outer membrane porin F	-	-	227	345	1.5E-52

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.