Pseudomonas sp. FeS53a, SZ55_RS19125
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. FeS53a scaffold15.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AATAGTGGCCTGATTCGAAAGCTTAAATTTCCAAGAATTCTGCTCCCCCTGTCAGGCTCCATAACCGTAAGCTTGTTTTGGCTAGTAGCGATGATGGTTT ATTGTATTCTTTACCCTATTCTGGGAGGTAGATTAAGCGTAGCTCTATTTTGGTATCCAGCCATCATAATTCCATACGCAGGCGCTATACTTGGCTTAAG CTTCACCATAAGCGTGCTCCAAATAACTCATCGCGACATTAAGCATATGACAGAAGTCTTTATCCCCTTACTGTTTTGGGTAACCCCAATAGTCTGGATG ACTTCTAATCTGCCGCACAGCATTGCCGAAGTTGCATCACTCAACCCCTTAGCACCTTTTTTTAACAGCTTCTCCGCGATTTTACACACAGGAACGCCAC CCTCTGCTTTTAATATTTTGCTCTGCTGGATGATAGGGCTCTCGTCATTAGCTATTGGCATAATTACATTTAAACGGGTTGATAGAGTAGTCGAACTACT
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| DNA Sequence for Gene |
>SZ55_RS19125
ATGAGTAGCATTGTTTTGAAAGCTGAAAATCTCAGTAAAGAATTTACCATTAGACACAATAGAGGAGGCATGAAGCATAAAATTGCTGGAATATTCAACT CTCGCTTCAAGGAACGCGTAGAAAAATTTAGAGCCGTAAACAATGTCTCATTCACTCTTAGCAAGGGAGAGTCACTTTCGCTGATAGGCCATAACGGCTC TGGCAAAAGTACTCTTCTACAACTGGTTAGCGGCATACTGATTCCAACATACGGATCGGTTTTTTCTAATGGCCGTATAGCACCGCTCATTGAACTTGGA GTCGGCTTCCATCCAGAGCTAACTGGCGAAGAAAATATCTACCTCAACGCCAGCCTATATGGACTAAGCAACAAGGAGACACGGGCTAGATTCAATAGAA TCGTTGATTTTTCCGGACTAGGGAGCTTCATCGACATCCCCGTTAAAAATTACTCTTCCGGGATGTATATGAGGTTAGGCTTTTCAGTCGCTGTGAATGT TGAACCTAAAATTTTGCTTGCCGACGAGGTTTTAGCTGTTGGCGATGAAGATTTTCAGAGCAAGTGCTACCAGCAAATCCGTGATATGCAAGATGACGGT ATGGCGCTGATTCTCGTAACCCACTCAAAGGAACAGGGTAGGCTCTTCTGTCAAAGATACATCCATCTTGAAAAAGGAAGCGTAATAGATGAAGGTGAAT TCTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGACTAGTTATATTTTTGTTGCTTACGACACGAGTACTTTAGTAAAACAAAGGATTCTATATGCTTCAGATCATTATTCCCATGGCTGGTGCTGGCAGCC GATTTGCGGTAGCTGGCTACAATGACCCCAAACCGCTCATCCAAGTGCACGGCGTACCAATGATTAAGGTAGTGATAGAAAATCTTACGCCAGTTAGAGA CCACAAATTCATCTTCATCTGCCAAGCCGACCATGTCTCTAAGTATGGGCTACATGAAAAGCTTAACTCATGGGCGCCAGGTTGTGAAATCGTTGAACTG GACGGGCTAACGGAAGGAGCTGCGTGCACCGTTCATGCAGCTAAACACCTCATAAATAACAACAATCCAGTTATGATTGCGAATAGTGATCAATACGTAG ACATAGATATTAATGGCTACTTAGAGACCATGGATGTCGCTGATGCCGATGGTTTAATCATGACGATGAAAGCAGATGACCCCAAGTGGTCGTTTGTTGG
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| Amino Acid Sequence |
>ABC transporter ATP-binding protein
MSSIVLKAENLSKEFTIRHNRGGMKHKIAGIFNSRFKERVEKFRAVNNVSFTLSKGESLSLIGHNGSGKSTLLQLVSGILIPTYGSVFSNGRIAPLIELG VGFHPELTGEENIYLNASLYGLSNKETRARFNRIVDFSGLGSFIDIPVKNYSSGMYMRLGFSVAVNVEPKILLADEVLAVGDEDFQSKCYQQIRDMQDDG MALILVTHSKEQGRLFCQRYIHLEKGSVIDEGEF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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