Pseudomonas sp. FeS53a, SZ55_RS13110

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. FeS53a scaffold14.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCACGTGCCAGGGCAGCCTTCAGCGGGGCCGGGTCGATCTGGAACAGCAGGTCGCCGGCCTTGACGTCGGCGCCTTCCTCGAAGCGCTTCTGCACCACGA TGCCGGCCACCCGCGCCCGCACCTCGGCCACCCGCACCGGCTCGACGCGCCCGGGCAGCTCGGCGACCCGGGCCAGGGGCTCGGCCCGTACCAACACGGT CTGCACCTCGCGCGGCGGCATCTCGCCCACCGCGGCCTCGCCCGCCTGTTCACACCCGGCGAGCATCACGCCCGCCACCACCAGGGAAAGGATTCCCGTA CCGCGCCACCTGCCCATGCTTCACCTGCACCTTGGCCTTGAACCTTGAAGGGCGCGAATAATCCTACCAAAAACCAAATGAGTCAATTTTGTCTCACTGG AGACTTTGTTAAACAAAATTGCACAGTGCCATTGAGGATTGGGACTTTTCCTGCACAATGGCGCCCTCCCTGTCCGTTGAATCGAGCCCGAGGACATGCC
DNA Sequence for Gene
>SZ55_RS13110
ATGCCGCAGCCCCACCAAGACGAACGCCTGCTCAAGGCCCTCGCCGTGGCCTTCGTGGACCGACCACGCGCCACCCTCAAGGACCTGGCCGAGGCCGCCG GGGTCAGCAAGGCCACCCTGCACCGCTTCTGCGGCACCCGGGACAACCTGGAAGAGATGCTGATGAGCTACGGCGCCGAGGTGCTGCACCAGATCATTTC CGAGCCGGCCCTGCAGCAGGGCGACCCGCTGACGGGCCTGCGCACGCTGATCCGCGAGCACCTGGCGAACCGCGAGATGCTGGTGTTCCTGATGTTCCAG TACCGCCCCGAGACCCTGCATTCGGAGCTCGAGGCGAGCCGCTGGCAGCCCTATGTGGATGCGCTGGATGCCTTCTTCCTGCGCGGTCAGCAGGACGGCC TGCTGCGCATCGACACCCCTGCACCGGTGATGACGGAACTGTTCATCTCGCTGATCTACGGCATCGCCGACGCCGAGCGCCGGGGGCGCGCCGCGCCGGC CCAGTCGGCACTGGCCGTCGAGCAGTTCTTCCTCCAGGGCGCGGCCCGGGCTTCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACAGGTGCCGGGTGACGCTCTACTAGGCTGTAGCAAGGCCAAGCGACCCCGGATCCCCATGAGCAACGTTCAACACGAAGCCGAACGCCTCCAGCTGCTG CGCAGCCTGGAAATCCTCGACACACCGCCTGAGCAGGTGTTCGACCGCATCACCCGCGTGCTGGCCAGCACCCTGGGGGTACCCATCGCCCTGGTGTCCC TGGTGGACGAGCACCGCCAGTGGTTCAAGTCCCGGGTGGGGCTGGACGTGCAGGAGACGCCGCGCGACGCCGCCTTCTGCGTCCACGCCATCGGCGGCAG CGGAACCCTGGTGGTGGAGGACGCCCGCACCGACGCCCGCTTCCGCGACAACCCCATGGTTGTCGGCGCCCCTCACATCCGCTTCTACGCCGGCACGCCG ATCCGCACCCGCGACGGCTTCGCCCTGGGCACCCTGTGTGCCATCGACGACCGCCCCCGGCAGCTCACCGACGAACAGCGCCGGGTGCTGGAAGACCTGG
Amino Acid Sequence
>transcriptional regulator
MPQPHQDERLLKALAVAFVDRPRATLKDLAEAAGVSKATLHRFCGTRDNLEEMLMSYGAEVLHQIISEPALQQGDPLTGLRTLIREHLANREMLVFLMFQ YRPETLHSELEASRWQPYVDALDAFFLRGQQDGLLRIDTPAPVMTELFISLIYGIADAERRGRAAPAQSALAVEQFFLQGAARAS
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site