Pseudomonas sp. FeS53a, SZ55_RS02015

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. FeS53a scaffold10.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTCGGCGCCCACGCCCTGACCCTGGCGCACCAGCGGGTGAACGGCGACCAGCCCTTCGACTACCTCGGCTTCGACCGCCAGCCCGGCACCTCCATCTACC TCGCCAACTCCGTGCAGGTCCTCGACTTCAACGCCCCCAACGAGCGCTCCTGGCAAGTGCGCTACGACCTCGACTTCGCCCCCTTCGGCGTGCCCGGGCT CAGCTTCATGAGCCGCTACATCCGGGGCGACCACATCGACGACAGCCACCGCAGCAGCCCCAGCGCCTACCAGCGCTACGGCGAGGCCGGCAAGCGCTGG GAGCGGGACATCGAACTCGGCTACGTCGTCCAGGGCGGCAGCGCCAAGGACCTCTCCATCCGCCTGCGCCAGGCCAGCATCCGCTCCACCGCCCAGGTCG GCCGGGCCGACACCGCCGACAACAACGAACTGCGGGTGATCATCGACTACCCGCTGCAACTGCTCTGACGCCCCGCATAACGACAACACCGAGGCACACG
DNA Sequence for Gene
>SZ55_RS02015
ATGAACGACAAGACAGGATTCGCCGCCATCACCGCGCGCGAGCAGGGGCTCAAGCGCCAGCTCACCTCCGGCCAGATGGCCATGATCGCCATTGGCGGTG CCATCGGCACCGGCCTGTTCATGGGCAGCAGCTTCGCCATCGGCTTCGCCGGCCCCGGCGTGCTGGTCAGCTACGCCATCGGCGCCCTGATCGCCCTGCT GCTCATGGGCTGCCTGGCCGAAATGACCGTCGCCCACCCCACCTCCGGCTCCTTCGGCGCCTACGCCGAGTTCTATGTCAGCCCGCTGGCTGGCTTCCTG GTGCGCTACGCCTACTGGGCCGCCATCGTCCTGGCGGTCGGCACCGAAGTGACCGCCATCGCCGTGTACATGAAGTACTGGTTCCCCGCCGTTGCCGGCT GGGTCTGGATCCTGCTGTTCTCCGCCGCCCTGGTGGTCACCAACGCCATCAGCGTCAAGGCGTTCGGCCACTTCGAGTACGGCTTCTCGGCGATCAAGAT CGGTGCCATCGTCGCCTTCATCCTGCTCGGCGCCTGGCTGGTGTTCGGCGGCGGTGACCCCGCCTACGGCTTCCACCACTACGTCGCCCACGGCGGCTTC ATGCCCCATGGCGTCTCCGGCGTCTGGATCGCCGTGATCATCTCCATCTTCAGCTACCTCAGCATCGAGATGATCGCCGTCGCCGCCGGCGAAGCCGAGC AGCCGGAGGTGGCCGTCAAGCGCGCCTTCCGCGTCACCATGGCGCGCCTGCTGGTGTTCTACATCCTCACCCTCGCGCTGATCCTCGCCCTGGTGCCGTG GAACCAGTCGGGGCAGGGCGCCCAGAGCCCCTTCGTGATGGTGATGGAGCAGGTGGGCATCCCCGGCGCCACCGGGCTGATCAACTTCGTCATCCTCGTC GCCGCCCTGTCGGCCATGAACAGCCAGCTCTACACCACCACCCGGATGATGTTCAGCCTCGCCCGTGCCGGCCACGCCCCGCGCCTGATGGGGCGCCTCG GCAGCAACGGCGTCCCGCTCAATGCCCTGGCCCTGTCCTGCACCGGCATCGCCCTGGCCACCCTGGTCAACCTGGTGTTCCCCGAGGAGTCCTTCATGCT GATGATGGCCATCTCCATCTTCGGCGCGCTGTTCGCCTGGATGATGATCTTCCTCACCCACTACCGCTTCCGCCGCTACCACGCGCGCAACGGCGGCCTG CAGCTGTCCTTCCGCATGTGGGGCTTCCCCTGGGCGACCCTGCTGGGCTTCGGGCTGATGGTGGCCATCCTCATCACCACCGCCTTCGTCCCGGCCTTCC ACATGACCCTGGTGTTCGGCATCCCCTTCCTGCTCGTGCTCTGGGGCGCCTTCCACCTGCTCACGCGGCGTGCCAGCCTGCTGGTGGAGGCCGACCAGGC GCCGGTGGGGGAGCGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TACCGCCGCAATCCACCTGGAAAAAGACACGCTTCGGCGTGTCTTTTTCGTTGCAGTGTCGAAGCACACGCGCCCCCATCTGCGAACCCATCGACAGGAA CTCATCCCGGGGATTGACCTGGCCCGCGCCCCGTCGATGATGGCGCCCTGGGCACGCCCATCCGCAGGCAGGGAAGCCGCCTCGCCGGGCGTCGAGGATG ACCCATACAAGGAGGTCGGCAACATGCAGGGCATGGCATTGATCGGGATGCTGCTGGTGGGCACGCTGCCCGCGCTGCTCCCCGGGCGGCGAGCGTTTCT GGTGGCCCTGGCCGGGGTGGCCGTGCTCTACGGGGCGCAAGTCGCCTGGTTCTTCTGGGCCGTGGAGCGGGATGCGACCGAGGGGCCAGCCTTCATGGCA GGCATCGCCATCCTGGGCGTCGAGCAGGTGCTCGTCGTTTCCTCGATCATCGGGCGGCTCATCGCCCACTTCCTGGCCCGCCGACTGGGCCGGTACGCGC
Amino Acid Sequence
>amino acid permease
MNDKTGFAAITAREQGLKRQLTSGQMAMIAIGGAIGTGLFMGSSFAIGFAGPGVLVSYAIGALIALLLMGCLAEMTVAHPTSGSFGAYAEFYVSPLAGFL VRYAYWAAIVLAVGTEVTAIAVYMKYWFPAVAGWVWILLFSAALVVTNAISVKAFGHFEYGFSAIKIGAIVAFILLGAWLVFGGGDPAYGFHHYVAHGGF MPHGVSGVWIAVIISIFSYLSIEMIAVAAGEAEQPEVAVKRAFRVTMARLLVFYILTLALILALVPWNQSGQGAQSPFVMVMEQVGIPGATGLINFVILV AALSAMNSQLYTTTRMMFSLARAGHAPRLMGRLGSNGVPLNALALSCTGIALATLVNLVFPEESFMLMMAISIFGALFAWMMIFLTHYRFRRYHARNGGL QLSFRMWGFPWATLLGFGLMVAILITTAFVPAFHMTLVFGIPFLLVLWGAFHLLTRRASLLVEADQAPVGER
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site