Pseudomonas sp. FeS53a, SZ55_RS16325

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. FeS53a scaffold1.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCCGAAGGCGCTGATCGGCAACGAGGTGAACCGTCTGCGCGTTCAGGCTGTTCAGCAGTTCGGCGGCAACATCAACCCTGATCAACTGCCGGCCGAGCTG TTCGAAGAGCAAGCCAAGCGTCGCGTGGTTCTGGGTCTGATCGTGGCTGAAGTGGTCAAGCAGTTCGAGCTGAAGCCGGACGATGCCCGCGTTCGCGAGC TGATCGAGGAAATGGCCTCCGCTTACCAGGAGCCTGAGCAGGTCGTGGCCTGGTACTACAAGAACGACCAGCAGCTGAACGAAGTCCGTTCTGTTGTGCT GGAAGAACAAGTTGTAGATACTGTCCTGCAGAAGGCCAACGTGACTGACAAAGCGGTCTCCTACGAAGATGCAGTCAAGCCGGTAGAAGCTTCGCAAGCC GCCTGATCGTTTCGCCTCGTTCGAGCACACCATAAGCCAGCCTCCGAGCTGGCTTATGCGTCTTTGAGACATGACATTAGTTAGGGAGCGATCGCTGGAC
DNA Sequence for Gene
>SZ55_RS16325
ATGTCCCGCAATTCTTTTATGCAGCAACAAGTCCCTGATATCCAGGCTGCTGGCGGCCTCGTGCCGATGGTGGTGGAGCAGTCTGCCCGTGGCGAGCGCG CCTACGACATCTATTCCCGCCTGCTGAAGGAGCGGGTGATCTTCCTGGTGGGTCAGGTCGAGGACTACATGGCCAACCTGGTGGTTGCCCAGTTGCTCTT CCTCGAAGCCGAGAACCCCGACAAGGACATTCACCTCTACATCAACTCTCCGGGTGGTTCGGTGACTGCCGGGATGTCGATCTACGACACCATGCAGTTC ATCAAGCCTGACGTATCCACCATCTGCATCGGCCAAGCCTGCAGCATGGGTGCGTTGCTCCTGGCGGGTGGTGCAGCTGGCAAGCGTTACTGCCTGCCGC ACTCGCGCATGATGATCCACCAGCCTCTGGGTGGTTTCCAGGGGCAGGCTTCGGACATCGAGATTCACGCGCGTGAGATCCTCACGATCCGTGAGCGCCT GAACAAGATCTTGGCTGATCACACGGGACAGCCGATCGATGTGATCGCCCGTGATACTGATCGCGACAACTTCATGAGTGGCGATGAGGCTGTCAAATAC GGACTGATCGATCAGGTCCTCAGCAAGCGTCAGCTCGCCAGCTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CACCATCCGCAGCACCGTGGCCGGCTCCCGCCGGCCACTCCGCGGGCTTGAAAATGCCCGCATTTGCCTTCATCTTGTGTTTCATGCCTATCCCGACTGG ATTGATCGAATGACTGACACCCGCAATGGCGAGGACAACGGCAAACTGCTTTATTGCTCCTTCTGCGGCAAAAGCCAGCACGAAGTGCGCAAGTTGATTG CTGGCCCTTCCGTCTTTATCTGCGACGAGTGCGTCGACCTGTGCAACGACATCATCCGTGAGGAGGTGCAGGAAGCCCAGGCCGAGAGCAATGCGCACAA GCTGCCGGCGCCCAAGGAAATCCGCACCATCCTGGATCAGTATGTGATTGGTCAGGAGCGCGCGAAGAAGGTCCTCGCGGTCGCCGTCTACAACCACTAC AAGCGTCTCAATCAGCGCGACAAGAAGGATGACATCGAGCTCGGCAAGAGCAACATCCTCCTGATCGGCCCTACGGGTTCCGGCAAGACGCTGCTGGCCG
Amino Acid Sequence
>Clp protease ClpP
MSRNSFMQQQVPDIQAAGGLVPMVVEQSARGERAYDIYSRLLKERVIFLVGQVEDYMANLVVAQLLFLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQF IKPDVSTICIGQACSMGALLLAGGAAGKRYCLPHSRMMIHQPLGGFQGQASDIEIHAREILTIRERLNKILADHTGQPIDVIARDTDRDNFMSGDEAVKY GLIDQVLSKRQLAS
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site