Pseudomonas weihenstephanensis DSM 29166, TU86_RS08330
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. DSM 29166 3_684107_40.2885, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCTCGGCCCGCCGCGCGCCTCGCTGGACATCGCGCAGATGCTGGCGGGCAACGACCAACCGGCGCTGTCGCAGGTGCGTTCGCGGCACTTGGGTTTCATC TTGCAGAGTGGCGGCCTGCTGCCGTTTTTGAGCGTGCGCGACAACATCAGCCTGCCCCGGCGTTTGTTGGGCATGCCAGCAGAGAGTGCGCAGGTAGATC GCGCGGTCCACGCCCTGCGCCTCGACGGCTTGCTCGGCAAACTGCCGCAGGCCTTGTCCATCGGTGAGCGCCAGCGTGTGGCGTGTGTGCGGGCCATCGC CCATGAACCGCAATTGCTGCTGGCTGACGAACCCACGGCTTCACTCGATCCGCACAGCGCCAAGCGTCTGTTTGAGTTGTTGCTCAGCCTGGTTAACGAG TTGGGCTTGAGCGCGCTGGTGGTGTCCCACGACTGGGCGCTGGTGCGCGACTTTGGCTTGCCGCGCCTGGGCGCGGTCAGCCGTCAGGGAGAAACACTGT
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| DNA Sequence for Gene |
>TU86_RS08330
TTGAAGCGATGGATTAGCCGCCTCGGCCTGCTCGGTTCGCTGGCGGTCCAGGACCTCTGGCACGACCGCAAAGTGTCATTCTGTATCGCCGCCTCGCTGG TGGCGGTGATCGCGCCGCTGTTGCTGCTGTTCGGACTCAAACACGGGGTGGTCAGCCAGTTGCAGAACGAACTGCTGAGCGATCCGCGCAACCTTGAAGT GAAAATGCTCAGCAGCGGCAATTACGACACGGCGTGGATCGAGCGTTTGCGCCTGCAACCTGAGGTCGGTTTTGCCATCGGCCAGACCCGCTCGCTTAAT ACGCAGGCTGACCTGTTGGTGGGCATGCAGCGTTTTGTCGAAAACGCCGAAATCATTCCCAGCGATGCGGGCGACCCGCTGCTTAACCTGCCGCAGATCC GCCTCGACGGCCAACAAGTGATTCTCAGTGATCGCGCCGCCCAGCGTTTGCAGGCCAAGGTCGGTGATAACGTGCGTTTGCGCGTCTCACGGCGTCTAGA CGGGATCAATGAGCGCGGCGAACTGAATGTGCAGGTGGTGGCCGTGCTCGATGCCGCACGCTTTGGCCGCGCCGCAGGTTTTGTCGCGCCGCCGTTGCTG CTGCAACTTGAGCGTTTTCGCGACGGCTATCAGGTGCCCGCGTTTGGCCTTGACACCGGTAAGCCGCAGGGGGAGCTGCAACCGCTTTACGCCCGTGCTC GCGTGTATGCCCGCGACATCGATGCGGTCGCGCCGCTGGAGCGCTGGCTCAACCAACAAAACATCGAAACCGCCAGCCGTTTGGCCGATATCGACAACGT TAAAGCCATCAACCATGTGCTGGGCCTGATCTTCGGCGTGATTGCCGCGGCGGCGCTGATCGGCTGTATTGCCTCGATGATCGGCGCCTTTTTGGCCAAC ATCGACCGCAAGCGCAAAAGCCTCGCGGTGCTGCGCTTGCTCGGTTTTACCAGCCCGGCGGTGGCCGGATTCGTCATCGCCCAAGCGTTGTTGTTGAGCC TGGTGGGCTATGTCGGCGGTCTCGCATTTTATGGGGTCGGCAGCCTGCTGTTCGACCACTTGCTCGGCAGCAGTCAGGCCACTGGCACCTTTGTTTGTCA CATCACTGTCTGGCACGGGCTGGCAGCCCTGCTGATTGCTTTATTGGTCGCAGCACTGGTCGCCATTATCGGCGCGCTACGGGCCATCAGCATCCAACCT GCGGAGAGTCTGCGTGAGCTATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACGTGTTGTGTTGATCGCATCCTTAAGCCTTGGCTACCTGCTCAACGCCTCGGCGGCGGGCTGGGACGAGAAGTATTACAACCCCGCGCCCGACGCCAAT GACGTGGTGCTGCCAATGCCGTGCGACGGTGCAATGGTGTTTCGCAAGGTGTTCATCCCGGTGACCGGTCCGCTGGACGACTACCCGATCAACATTGGTC AGGACAGCCCGGAGTGGGGTTACGTCGAGCAAAAGCGCCCCTCGTTCATTGCGGGTAGCTTTACCGGCGCCAAGAGCGACAAGTCGCGTTACTACTTGAT GGCCAAGTACGAAATGAGTCAGTTGCAATACCAGGCACTGACCGCCGAGACCTGCCCCGCACCGTCCAACAAACTGCGCTTGGCGCAAGTGGCCGTGAGC TGGGTGCAAGCCATCGACGCCAGCGACAAATACAACCTGTGGTTGCGCAAACATGCGGCCGACAAGTTGCCCAAAGAAGACGGCGCGCTGGGCTTTTTGC
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| Amino Acid Sequence |
>ABC transporter permease
MKRWISRLGLLGSLAVQDLWHDRKVSFCIAASLVAVIAPLLLLFGLKHGVVSQLQNELLSDPRNLEVKMLSSGNYDTAWIERLRLQPEVGFAIGQTRSLN TQADLLVGMQRFVENAEIIPSDAGDPLLNLPQIRLDGQQVILSDRAAQRLQAKVGDNVRLRVSRRLDGINERGELNVQVVAVLDAARFGRAAGFVAPPLL LQLERFRDGYQVPAFGLDTGKPQGELQPLYARARVYARDIDAVAPLERWLNQQNIETASRLADIDNVKAINHVLGLIFGVIAAAALIGCIASMIGAFLAN IDRKRKSLAVLRLLGFTSPAVAGFVIAQALLLSLVGYVGGLAFYGVGSLLFDHLLGSSQATGTFVCHITVWHGLAALLIALLVAALVAIIGALRAISIQP AESLREL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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