Pseudomonas weihenstephanensis DSM 29166, TU86_RS02625

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. DSM 29166 1_855826_38.97, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AAAAAGCCGGCGATAATGCGGCCAAGGTCAAATTGACCCTGCCGGACGGCAGCGAGTACGCACAAGAAGGTCGCCTGGAATTCAGCGAAGTGTCGGTCGA CGAAACCACCGGTTCCGTGACGCTGCGTGCACTGTTCCCCAACCCCGACGAGATTTTGTTGCCAGGCATGTTTGTGCACGCGCAACTGGAAGCGGGTATC GACAGCCACGCGATTTTGGCACCTCAAGTGGGCGTGACGCATAACCTCAAAGGCCAGCCGACAGCAATGGTTGTAGGGCCGGACAACAAGGTCGAACTGC GCGTACTGCAAGCATCCCGTACCGTGGGCAGCGACTGGCTGGTCGAGAAAGGTTTGAACCCTGGCGATCGCCTGATCACCGACGGCCTGCAATTCGTCAA GCCAGGTGTTGAAGTCAAGATCATGGAAAAACCACAAGGCGCAACCCCGGCAGCTGCCCCGGCAACAGAACAAGCTGCAGGCAGTAAAGGGGAGTAAACC
DNA Sequence for Gene
>TU86_RS02625
ATGTCGAAATTTTTTATCGACCGTCCGATTTTCGCTTGGGTAATCGCCCTGGTGATCATGCTGGTCGGGGCTTTATCGATCCTCAAACTTCCGATCAACC AATACCCGAGCATCGCACCGCCGGCTATCTCGATCTCCGTGACCTACCCGGGCGCTTCGGCGCAAACCGTGCAGGACACCGTGGTCCAGGTGATCGAGCA GCAGCTCAACGGTATTGACCACCTGCGTTATGTATCGTCTGAAAGTAACTCCGACGGCAGCATGACCATCACCGCCACGTTCGAGCAAGGCACCGACCCC GACACCGCTCAGGTGCAGGTGCAGAACAAACTCAACCTGGCGACCCCACTGCTGCCTCAAGAGGTTCAGCAGCAAGGTATCCGCGTGACCAAGGCAGTGA AAAACTTCCTGATGGTTATCGGTGTGGTGTCTGAAGACGGCAGCATGAACAAAGACGACTTGTCGAACTACATCGTCTCTAACATGCAGGACCCGATCTC CCGTACCGAAGGTGTGGGCGACTTCCAGGTGTTCGGCGCCCAGTACGCCATGCGTATCTGGCTCGATCCAGCCAAGCTGAACAAGTACAACCTGACCCCG GTGGACGTTAAGTCCGCTATCAGCTCACAGAACGTACAGGTGTCCTCCGGGCAACTGGGCGGCCTGCCAGCTGTAAAAGGTCAAGAGCTGAACGCAACCA TCATCGGCAAAACGCGCCTGCAAACTGCTGAAGAGTTCAAAAAGATACTGCTTAAAGTCAACACCGACGGCTCTCAGGTACGTCTGCACGACGTCGCCGA AGTCGCTTTGGGCGGTGAGAACTACAGCATCAGCGCGCAGTACAACGGCAAACCGTCTTCGGGTCTGGCGATCAAACTGGCCACCAATGCCAACGCACTG GACACGGCCAAGGCGCTGCACCAAACCATCAATGATCTGGCTCCGTTCTTCCCGCCCGGCATGAAAGTGGTTTACCCATACGACACCACGCCAGTGGTAT CGGCCTCGATCAAGGGCGTTGTTGAAACCCTGGTTGAAGCCGTCGCTCTGGTGTTCCTGGTGATGTTCCTGTTCCTGCAAAACTTCCGCGCCACCATCAT CACCACCATGACGGTGCCAGTGGTATTGCTGGGTACATTCGGCATTCTCGCAGCAGCCGGTTTCAGCATTAACACCCTGACCATGTTCGGCATGGTACTG GCCATCGGCTTGCTGGTGGACGACGCCATCGTTGTGGTGGAAAACGTCGAACGGGTCATGAGCGAAGAAGGATTGTCACCCAAAGAAGCCACCAAGAAAT CCATGGAGCAAATCCAGGGAGCCCTGGTGGGTATTGCCTTGGTACTGTCGGCCGTATTGCTGCCAATGGCGTTCTTTAGCGGCTCAACCGGTGTGATCTA CAAACAGTTCTCGATCACTATTGTTTCGGCGATGGCGCTTTCGGTACTGGTTGCCCTGATCTTCACCCCGGCCTTGTGCGCCACCATGCTCAAGCCCGTC AAAAAAGGGGATCACGGCGAAAACAAACGCGGTTTCTTCGGCTGGTTCAACCGCACTTTCGACAGTGGCGTGAAGCGCTACGAGAAAGGTGTCGGCAACA TCCTGCGCCACAAGGCTCCGTATCTGCTGGCATACGTGCTGATCGTCGTCGGCATGGTCTTCCTGTTTACACGCATTCCTACCTCGTTCCTGCCAGAAGA AGACCAGGGCGTACTCTTCGCCCAGGTCCAAACTCCAGCCGGTACGACAGCGGAACGCACACAGGTAGTAATTGACCGCATGCGCGAATACTTGCTCGCC GATGAATCGGCGGCAGTGTCTTCGGTGTTTACCGTGAACGGCTTTAACTTCGCCGGTCGCGGCCAAAGCTCCGGTCTGGCGTTCATCATGCTCAAGCCTT GGGGCGAGCGTGATGCCGACAACAGCGTGTTTGCACTGGCAGCCCGTGCTCAGGCGCACTTCTCCACCTTCCGCGATGCAATGGTGTTTGCCTTTGCCCC GCCAGCAGTGATGGAGCTGGGTAACGCCACCGGTTTTGACGTGTACCTGCAAGACCGCGCCGGTATTGGCCACGAAAAGCTGATGCAAGCCCGCAACCAG TTCCTGGGCATGGCATCGCAAAGCAAGATCCTGGCAGGCGTGCGACCTAACGGCCTGAACGATGAACCGCAATACCAACTGGAAATTGATGACGAAGCGG CTCGCGCCCTGGGCGTTAGCCTGACAGACATCAATAACACCCTGTCTATCGGTCTGGGTGCCAGCTACGTCAACGACTTCATCGACCGTGGTCGTGTGAA AAAGGTTTACCTGCAAGGCGAAGCTGACTCGCGGATGAACCCCGAAGACCTGAAGAAGTGGTACGTGCGTAACGACGAAGGAACCATGGTGCCGTTCTCG GCGTTCGCCAAAGGCAAGTGGACCTACGGTGCACCGAAGCTGTCGCGCTACAACGGCGTAGAAGCTATGGAAATCCTCGGCGCCCCGGCACCCGGCTACA GCAGTGGTGAAGCCATGGCTGAAGTTGAAGCCCTGGCCAAGAAACTGCCGGCAGGTGTAGGTATTTCCTGGACTGGCCTGTCATACGAGGAGCGTCTGTC GGGTTCGCAAGCACCTGCTTTGTACGCAATTTCCTTGCTGATGGTGTTCCTGTGTCTCGCAGCGCTGTATGAAAGCTGGTCAATCCCGATTGCAGTGATG TTGGTTGTACCGCTGGGGATTATCGGCGCCTTGCTGGCCACCAGCCTGCGCGGACTGTCCAACGACGTGTACTTCCAGGTGGGCTTGCTCACGACCATCG GTCTGGCATCGAAAAACGCCATTCTGATCGTCGAGTTCGCCAAAGAGCTGCATGAACAAGGGCGAACCCTGACCGAAGCCGCCATCGAGGCGTGCCGTAT GCGTCTGCGTCCGATCATCATGACGTCGCTGGCGTTCGTATTGGGTGTGATTCCGCTGGCCATCTCCTCGGGTGCCGGTTCAGGCAGCCAGCACGCCATT GGTACCGGTGTAATCGGCGGTATGATCACCGCCACGGTTCTGGCCGTGTTCTGGGTGCCGCTGTTCTTCGTTGCCGTGTCGTCCTTTGGCAGCAAGGACA AAGAAGAACAGAAGAAAGTAGATCTGACTAAAACTCCAAATCAAGAGGCTGGCCAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCAAGTCGCTTCTCGCAGTAGCGGTCGCAGCGTTTACGCTGGGCGGCTGCTCGCTGATCCCTGACTACCAGCGCCCTGAAGCGCCGGTAGCAGCGCAGTA CCCGCAAGGCCCGGCCTACAAGCCAAACGAAGCGCCGAATCAAACGGCTGCCGAGCAAGGCTGGCGTCAGTTTTTTCATGACCCGGCCCTGCAACAGTTG ATTCAGACGGCACTGGTCAACAACCGTGACCTTCGGGTCGCGGCCTTGAACATTGATGCATATGCCGCGCAGTACCGTATTCAGCGTGCGGACCTGTTCC CGGCAGTAAACGCGAATGCCAGCGGTAGCCGTCAACGCACGCCTGGGCGCATGTCGCAAACAGGCGAGTCGGGCATCACCAGCCAGTACTCGGCAACCCT TGGGGTCAGCGCGTATGAACTGGACCTGTTCGGGCGGATTCGCAGCCTGAACGATCAGGCGTTGCAGAACTACTTTGCAACCGAAGAAGCCCGCCGCACG
Amino Acid Sequence
>multidrug transporter
MSKFFIDRPIFAWVIALVIMLVGALSILKLPINQYPSIAPPAISISVTYPGASAQTVQDTVVQVIEQQLNGIDHLRYVSSESNSDGSMTITATFEQGTDP DTAQVQVQNKLNLATPLLPQEVQQQGIRVTKAVKNFLMVIGVVSEDGSMNKDDLSNYIVSNMQDPISRTEGVGDFQVFGAQYAMRIWLDPAKLNKYNLTP VDVKSAISSQNVQVSSGQLGGLPAVKGQELNATIIGKTRLQTAEEFKKILLKVNTDGSQVRLHDVAEVALGGENYSISAQYNGKPSSGLAIKLATNANAL DTAKALHQTINDLAPFFPPGMKVVYPYDTTPVVSASIKGVVETLVEAVALVFLVMFLFLQNFRATIITTMTVPVVLLGTFGILAAAGFSINTLTMFGMVL AIGLLVDDAIVVVENVERVMSEEGLSPKEATKKSMEQIQGALVGIALVLSAVLLPMAFFSGSTGVIYKQFSITIVSAMALSVLVALIFTPALCATMLKPV KKGDHGENKRGFFGWFNRTFDSGVKRYEKGVGNILRHKAPYLLAYVLIVVGMVFLFTRIPTSFLPEEDQGVLFAQVQTPAGTTAERTQVVIDRMREYLLA DESAAVSSVFTVNGFNFAGRGQSSGLAFIMLKPWGERDADNSVFALAARAQAHFSTFRDAMVFAFAPPAVMELGNATGFDVYLQDRAGIGHEKLMQARNQ FLGMASQSKILAGVRPNGLNDEPQYQLEIDDEAARALGVSLTDINNTLSIGLGASYVNDFIDRGRVKKVYLQGEADSRMNPEDLKKWYVRNDEGTMVPFS AFAKGKWTYGAPKLSRYNGVEAMEILGAPAPGYSSGEAMAEVEALAKKLPAGVGISWTGLSYEERLSGSQAPALYAISLLMVFLCLAALYESWSIPIAVM LVVPLGIIGALLATSLRGLSNDVYFQVGLLTTIGLASKNAILIVEFAKELHEQGRTLTEAAIEACRMRLRPIIMTSLAFVLGVIPLAISSGAGSGSQHAI GTGVIGGMITATVLAVFWVPLFFVAVSSFGSKDKEEQKKVDLTKTPNQEAGQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site