Pseudomonas weihenstephanensis DSM 29166, TU86_RS01650
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. DSM 29166 1_855826_38.97, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGACGTGGGTAGCATCATCGAAGCGTTTGCTTCGGAGCACGCGATGGTCAAAGTCGGTACCGTTATCGACCCGGACATGCGCGACGAACTGCACGTAACC GTTGTAGCGACCGGTCTGGGCGCGAAAATCGAGAAGCCGGTCAAAGTGATCGACAACACGGTTCAATCGTCCTACTCGGCGTCTTCGGCTCAAGCAGCGG CGGCACGTCAGGATGTGCGTCAGGAGACTCGCCAGGAGCTGCCAACGGTTAACTACCGTGACCTGGATCGCCCGACCGTGATGCGTAACCAAGCCCAGCA AGGCGCCACCACGGCTGCCAAGCTCAATCCTCAAGACGATCTGGATTACCTGGACATCCCGGCTTTCCTGCGTCGACAGGCTGATTAATGAAATCAATCA GGGGGATTAAGGTGATTGGTATTCAGCAAAGGTTCGGTCTGCTATTATCGCCAGCCTTTGTTGATACCAGTTCGCAATTTGCGCTGAAGCGGCCAATGCC
|
|
| DNA Sequence for Gene |
>TU86_RS01650
ATGATTAAACAACGCACCCTGAAAAATATTATCCGTGCCACAGGTGTCGGCCTGCACTCCGGTGAGAAGGTCTACCTGACCCTCAAGCCTGCGCCTGTGG ACACCGGCATCGTGTTTTGTCGTGCAGACCTTGACCCTGTGGTGCAGATCCCTGCTCGCGCGGAAAACGTCGGCGAGACAACCATGTCGACCACGTTGGT CAACGGCGATACCAAAGTAGACACGGTAGAGCACTTGCTCTCGGCCATGGCTGGCCTGGGGATCGATAACGCCTACGTCGAACTCTCCGCGTCTGAAGTC CCTATCATGGACGGTAGCGCTGGACCTTTCGTATTTTTGATTCAATCTGCCGGCCTGGAAGAACAGGACGCGCCGAAGAAATTCATCCGCATCCTGCGTG AAGTGACAGTGGAAGATGGCGACAAGCGCGCCACTTTTGTCCCTTTCGAAGGCTTCAAGGTGACTTTCGAGATCGATTTCGATCACCCGGTTTTCCGTAA TCGCACCCAAAGTGCAAGCGTGGATTTCTCAAGCACTTCGTTTGTAAAAGAAGTCAGCCGCGCCCGTACCTTTGGCTTCATGAGTGATATCGAGTACCTG CGCAAGCACAACCTCGCACTCGGTGGCAGCGTGGAAAACGCGATCGTTGTCGACGCAGACGGCGTACTGAACGAAGACGGTCTTCGCTATGAAGACGAAT TCGTGAAGCACAAGATCCTCGACGCAATTGGCGATCTCTACCTGTTGGGCAATAGCCTGATTGGTGAGTTCAAAGGCTTCAAGTCTGGCCACGCACTGAA CAACCAGCTGCTTCGCAAGCTGATTGAGCAGAAAGATGCATGGGAAGTCGTGACCTTTGAAGATGCCAGCACTGCACCGATCTCGTACATGCGTCCGGTT GCGGCAGTTTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GTAAAACTTCTTTCTCTAGTTTTTGAAGGCCACCCTCGGGTGGCCTTTTTTTTGTGCACCCAACCGTGCTGATGGCTGAATCAGGGCTGCACCGCTGTGG CTGGGTACAGTCCTGAATCTGGATCGCTACTTGTCGGCTTGGCTCACGGCTTAAAACACATCCAGCGGGTAATCGATGATCACGCGGTACTCATCCACAT TGTTGTCCACCGCCTGATACGCATCGTTACCGCGGTTGGCTGACCAGCGCAGAGCGACGCCGAGGTTTTTCGCCGGGCCTTCTTGCAGCACGTATTTGAC GGTCAGGTCGCGTTCCCAATGTTTGGCATGCTTGCCGTCGGCGTTGTACCAGTTGCTGTAGCCGACGCTGTTGGGGTCAACCTTGGTCAGGTCCAACTCA CCACGCGAGTACGACACCGTCGACGTCAGGCCCGCCAGACCCAGCCCGGCAAAGTCATATTCGTATTGCAGTTTCCAGGAGCGCTCGTTCGGGCCGTTAA
|
|
| Amino Acid Sequence |
>UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase
MIKQRTLKNIIRATGVGLHSGEKVYLTLKPAPVDTGIVFCRADLDPVVQIPARAENVGETTMSTTLVNGDTKVDTVEHLLSAMAGLGIDNAYVELSASEV PIMDGSAGPFVFLIQSAGLEEQDAPKKFIRILREVTVEDGDKRATFVPFEGFKVTFEIDFDHPVFRNRTQSASVDFSSTSFVKEVSRARTFGFMSDIEYL RKHNLALGGSVENAIVVDADGVLNEDGLRYEDEFVKHKILDAIGDLYLLGNSLIGEFKGFKSGHALNNQLLRKLIEQKDAWEVVTFEDASTAPISYMRPV AAV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|