Pseudomonas weihenstephanensis DSM 29166, TU86_RS21640
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. DSM 29166 13_82260_36.5812, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGAGGCCCGCATGAAAGGCATGGTCGCGGTCAGCCGTGAGGCTGCGCAATTGTTGGCCCAGCGCGGCTTGATGCCGGTGCCGGGGGGTTACAGCTGGCGC AGTGACAGCCGCTTGACGTTGCCGTCCCCGCTGCGTCTTACCGATGAACAGGCCATGTCATTCGTACAGCGTGTCAGTTGTCCCACCACGTTAGTGGTCG CTGAGGACGGGATGTTGACCGCCCATCCGACGTTGCTGGATAGGCTACCCTTTACGCTGGAACGGTTACCCGGCGGCCATCATTTACACGTCAATGACGA CGCGGGGGCAATCCTTGTTGCAGACTGTTTCAATCGGTTCTTCGCCGCTCCTTGACTTGCGGCGGCCAACTGCCGAGGCTTGGCGGGTTGAAATGGGAGA CAACCATGATAGATCTCTACACCGCTGCGACCTCGGAAGGCCACCCGGTCTCTATCGTGAGCAGGCTCAAACACACCTCACCTGCGGGTGACGCGTGCCG
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| DNA Sequence for Gene |
>TU86_RS21640
ATGAAACCGACCAATCGTTTTATCTGTGCGCTGGGCCTGAGCTGCCTCAGCCCTCTGCTGTGGGCGGCTGACGTGCCCGGCAGTCATGACTTGCGAGACG TGCCACGGCTGGCGGACGCGCAAATTGTCGATTACACCGTCAAGCCCGATGTCGAGCGCATCTACCCGATGGGCGCCATTCGAAAAATCAGCGGTCGGCT GCGTTTTGAAGGGCAGGTCAATGCCCGTGGCCAAACCACGGCGATCACCTACGAATTACCCGCTGAGCACTCGGCCACCGAAGCCTTTACGGCTGCGCGT GAAGCCCTGCAAGCCCAAGACGCGCAGTTGTTGTTCTGGTGCCAGGCCCGTGATTGTGGCGAAAGCAGCCTGTGGGCAAATGAGATTTTTGGTAACTCCA AGCTGGTGGGCGCCGACGGTGAGCAGTCCTTCCTGTTGATCCGCCTGGCGGCGCCCGAGCAAAATCAGTTGGTCGCGTTGTATGGCATCACGCGTGGCAA CCGCAAAGCCTACCTGCATGTCGAGCAGCTTCAGGCCAATGGCGATCTGGGCCAATTACTGCCCACCTCAGCCACCTTGCAGCGCCAGTTAAAAAGCACG GGCGAGCTGGATTTCCCTGCGCTCACGGCAGAACCTGATGCACAGTGGCTCAGCTTGATCAGTCGCGCATTGAACCTGGATGCAACCTCCAGGGTCAGCC TGAGCGGTGTTCACGCCGCCGCATGGCGCGACGGTCTGATCAAGAGCGGTGTAAGGGCTGCGCGCATTGAGCTGGGCGAGAACCCGGTCCAAGGGCTGCG GGTCGAACTGCTCCGTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACGCTTGTCTGCGACGGCTACACTCTGCGTAGCCGTCGTCTTTTTTTGCCTATGAATTTTCTGTGGAACACACATGCTCAATAACGATCGCCTGCTGGTG CAGATCCTGCTGCTGGTGTTGTTCGGTGCCAGTCTGTGGGTGATGGCGCCTTTTTGGTCGGCGCTGTTCTGGGGGGCGGTGCTGGCGTTTGCCAGTTGGC CGTTAATGCGCTTGCTGACGCGATGGCTCAATGGCCGTGAGTCGCTGGCAGCGGGCATTCTGACTTTGGGCTGGATGCTGCTGGTGGCAGGCCCGCTGGT GTGGCTGGGCTTCAACCTGGCGGATCACGTGCGCGACGCCACGACCTTCGTCAAGGATGTTCAGCTTGAAGGTTTGCCGCAGGCGCCTGGTTGGCTGGCG GGTATTCCGTTCATCGGTGAGCGCCTGGTGGGTATTTGGGACACCATCGATGAGCAGGGCGCGGCGCTGATCGTGGCCGTCAAGCCGTACTTGGGGCAGG
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| Amino Acid Sequence |
>lipoprotein
MKPTNRFICALGLSCLSPLLWAADVPGSHDLRDVPRLADAQIVDYTVKPDVERIYPMGAIRKISGRLRFEGQVNARGQTTAITYELPAEHSATEAFTAAR EALQAQDAQLLFWCQARDCGESSLWANEIFGNSKLVGADGEQSFLLIRLAAPEQNQLVALYGITRGNRKAYLHVEQLQANGDLGQLLPTSATLQRQLKST GELDFPALTAEPDAQWLSLISRALNLDATSRVSLSGVHAAAWRDGLIKSGVRAARIELGENPVQGLRVELLR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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