Pseudomonas weihenstephanensis DSM 29166, TU86_RS21040 (flhF)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. DSM 29166 12_133928_36.2809, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAAGGTCTTGCAGGCCCTGCTGGCTGAACAGGTGCCCGTACGCGACATTCGTAGTATTGCCGAAGCCGTCGCGAACAATGCGCACAAGAGTCAAGATACC GCCGCTTTGGTGGCCGCCGTGCGGGTTGGTTTGTCCCGCGCCATCGTCCAAAGCATTGTAGGCGTTGAGTCTGAGCTGCCAGTTATCACGCTGGAGCCAA GGTTGGAACAGATATTGCTCAATAGTCTGCAAAAGGCAGGACAAGGTCAGGAAGAGGGCGTTCTGCTGGAGCCAAGCATGGCTGAAAAGTTGCAGCGTTC CTTGATCGATGCCGCCCAACGCCAAGAGATGCAAGGCAACCCGGTGATCCTGTTGGTCGCCGGTCCGATACGCGCGATGCTTTCGCGGTTCGGCCGCCTG GCCGTGCCCAACCTGCATGTGCTGGCGTACCAGGAAATCCCTGACAACAAGCAAGTCACCATCGTTGCGACAGTAGGCCCGAACGGCTGAGGTTTGGTTT
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| DNA Sequence for Gene |
>TU86_RS21040
|flhF
ATGCAAGTGAAGCGTTTTTTCGCCGCCGATATGCGTCAGGCCATGAAACTGGTTCGTGATGAGCTGGGGGCTGATGCCGCCATTATTGGTAACCGCCGCA TTGCCGGTGGTGTTGAGTTGACCGCCGCGCTGGACTACAAGTTGTCCGCGCTGGCACCGCGTGTGCCTAACGTTGAGCTTGAAGAAGAGCTGCGCAAGAC CCAGTCGCGGATCGTTTCGGCCCAGGCTGAACTGAGCCTGCGCGGTGAAGGCGAGGCTGACGTGAGCCGGCAGTTGTTTGCCGGGTTGCCGCTGACCGCC GCCGAGCCGTTGATCGAGCCAACCTTTGATGAACCGCCACGTCCGGCTGCGCCCGCCGCGCCGAGCATGGACCAGCGTGCCTTCGACACCATGCGCTTTG AGCTCAATGGTTTGCGCGAACTGCTGGAAGTGCAGTTAGGCTCGTTGGCATGGAACCAGCTGCAAGGCAGCAAACCGGCGCAAGCCAACCTGTGGCGTCG TTTGCAGCGCATTGGCTTGTCGGGTCCGCTGTCGCGCGATTTGCTGGAGCAAGTCGCCGAGATCGAAGAGCCGCGCCAGGCGTGGCGCATGTTGTTGGCG TACCTGGCCCGCATGATCGCAACCCCGGAAATCGAGCCGCTCGAAGAGGGCGGCGTGATTGCGATGGTCGGCCCGGCGGGCATGGGTAAAACCACCACGC TGGCCAAGTTGGCCGCGCGTTACGTGCTCAAGTACGGCGCGCAGAACATTGCGCTGGTGAGCATGGACAGCTTTCGCATTGGTGCTCAGGAGCAACTCAA AACCCTGGGCCGCATCCTCAATGTGCCGGTCACGCATGTAGCGCCGGGTCAGTCATTGGGCCAAACCCTTGAGCCACTGTTGCGCAAACGCGTAGTACTG GTTGACACGGCGGGCCTGCAAGCCAGCGATCCGGCCCTGCGCCTGCAACTTGAAAGCCTGGCTGGGCGCGGCATCAAAGCCAAAAATTACCTGGTCTTGG CCACCACCAGTCAGAAACAAGTGCTGACGGCGGCTTACCACAGCTATAAACGTTGCGGGCTTGCCGGTTGCATCCTGACCAAACTGGATGAAACCGCAAG CCTTGGCGAAGTATTGAGTCTGGCCATCAGTCACGAGCTGCCAGTGGCCTATCTCACGGACGGTCCGCGTATTCCCGATGACCTCCATCTGCCGCGTCGC CACCAATTGGTGAGCCGTGCGGTCAGTGTACAAATGCAGGAAGAACCCAGCGAAGAGGCCATGGCCGATATGTTCGCTGATATCTACCACAGCCCCTCCA AACGGGTTGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGTAGTGACGATTACGTTGCAATGTACCTACATTGATGGTCTGCACAGTCCTGTTCCCGTTGAGGAACCCGCAGCCAGCGTATGTAGCCGCGTCTAAGTA AGACAAGGTAAAGAAAGATCATGGGCAGCATGCATCCCGTACAGGTGATCGCAGTGACCGGCGGCAAGGGTGGCGTCGGTAAAACTAACGTTTCAGTCAA CTTGTCGCTGGCGCTTGCCGAGTTGGGCAGGCGCGTGATGTTGCTGGACGCTGACCTGGGGTTGGCGAACGTCGACGTTCTGTTGGGCCTGACGCCCAAA TACACCCTGGCCGATGTGGTCGAGGGGCGGTGTGAGCTGCGCGAAGTATTGCTGCAAGGCCCTGGCGGGATTCGAATCGTGCCAGCGGCCTCGGGCACTC AAAGCATGGTTCACCTGAGCGCGGCGCAACACGCGGGCCTGATTCAGGCGTTCAGCGAAATTGGCGACAACCTTGATGTGCTGGTGATCGACACGGCCGC
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| Amino Acid Sequence |
>flagellar biosynthesis regulator FlhF
MQVKRFFAADMRQAMKLVRDELGADAAIIGNRRIAGGVELTAALDYKLSALAPRVPNVELEEELRKTQSRIVSAQAELSLRGEGEADVSRQLFAGLPLTA AEPLIEPTFDEPPRPAAPAAPSMDQRAFDTMRFELNGLRELLEVQLGSLAWNQLQGSKPAQANLWRRLQRIGLSGPLSRDLLEQVAEIEEPRQAWRMLLA YLARMIATPEIEPLEEGGVIAMVGPAGMGKTTTLAKLAARYVLKYGAQNIALVSMDSFRIGAQEQLKTLGRILNVPVTHVAPGQSLGQTLEPLLRKRVVL VDTAGLQASDPALRLQLESLAGRGIKAKNYLVLATTSQKQVLTAAYHSYKRCGLAGCILTKLDETASLGEVLSLAISHELPVAYLTDGPRIPDDLHLPRR HQLVSRAVSVQMQEEPSEEAMADMFADIYHSPSKRVG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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