Pseudomonas weihenstephanensis DSM 29166, TU86_RS21000 (fliN)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. DSM 29166 12_133928_36.2809, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTCGAGTACATCAACTCGGAAGTGAACCCGGCCATGGCCAATATCGTCGGTCCGAGCGAGGCGATTGTGGTCTCCACGTTCCATATCGAACTCGACGGCG GTGGCGGCGATCTGCACGTGACCATGCCGTACTCAATGATCGAGCCGGTGCGTGAAATGCTCGACGCCGGTTTCCAGTCCGACCTCGACGATCAGGACGA GCGCTGGAGCAAGGCGCTGCGCGAAGACGTGCTGGATGTCAGCGTGCCGCTCAGTGCCACGGTGGCGCGCCGTCAATTGCGCCTGCGTGACATCTTGCAC ATGCAGCCCGGTGACGTGATCCCGATTGAATTACAGGACGAGCTGGTGATGCGTGCCAATGGCGTGCCATCGTTCAAGGTCAAACTGGGCTCGCACAAGG GCAATCTCGCCCTGCAAGTGGTTGAGCCTATCGAGCGGCGTTAAGCGCCGTCTTCAAGAATTCGCTATGTAACTGATTGACTGCCCGCCGAGGACAAATG
DNA Sequence for Gene
>TU86_RS21000 |fliN
ATGGCTGACGAACACGATATAACTTCTGCCGAAGACCAGGCGCTCGCCGATGAATGGGCGGCTGCGCTGGAAGAAACTGGCGAAGTGGGCCAGCACGACA TCGACGCCTTGCTGGCGGCAGATGCGGCCAAGGCCCCGGCTTCCAATCGCTTGCCGATGGAAGAATTTGGCAGCGTGCCGCGCAATAACGACCCGGTGAC GCTGGACGGCCCCAACCTGGACGTGATTCTGGATATTCCGGTCTCGATCTCCATGGAAGTGGGCAGCACCGACATCAACATTCGTAACCTGCTGCAACTC AACCAGGGATCGGTAATCGAGCTGGACCGCCTGGCCGGCGAGCCGCTGGATGTGCTGGTCAACGGCACCCTGATTGCGCACGGTGAAGTGGTTGTGGTCA ACGAAAAGTTCGGCATTCGCCTGACTGACGTGATCAGCCCAAGCGAACGCATCAAGAAGCTGCGCTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTGAAGCGGTTACTCGGCGGTTTACTGGCGTTCCCTTTAAGCGTGCTGGCGGCCGAGCCGGCTGCAACGGCCACCGCTGCTGTCGCGCCCGTGGTGGGCA GTGGCATCGGCGGGCAGCTCACGCAACTGGTGTTGGGCTTGCTGCTGGTGCTGGGCCTGATCTTTGGTCTGGCCTGGCTGCTGCGCAGGGTTCAGCACGC CGGGCCGCGTCAGGGGCAGGTGATCGAACTCATCAGCTCGCGTGCGCTGGGCGCGCGTGACCGGTTGGTGCTGGTGCAGGTGGGCAATGAGCAAATTTTG TTGGGCTTGACGCCGGGGCGTATCACGCCGCTGCATGTGCTCAAGGAGCCGGTGCAATTGCCGGAGTCTTCGCAGCCTGCAACGCCGGAGTTTGCCAAGC GCCTGATGGAACTGATGGGTAATCAAAAGGACAAGCCGTAATGCGTTTAGTCATTGCGCTGTTGTTAGCGCTGGCCGCGCCGTTGGCGTTCGGCGCCGAC
Amino Acid Sequence
>flagellar motor switch protein
MADEHDITSAEDQALADEWAAALEETGEVGQHDIDALLAADAAKAPASNRLPMEEFGSVPRNNDPVTLDGPNLDVILDIPVSISMEVGSTDINIRNLLQL NQGSVIELDRLAGEPLDVLVNGTLIAHGEVVVVNEKFGIRLTDVISPSERIKKLR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site