Pseudomonas weihenstephanensis DSM 29166, TU86_RS20925
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. DSM 29166 12_133928_36.2809, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGCGACATGCTGGTGTTTGCACGCGGCGAGTTGCCGTTGACCGATCGGGTCACGCCCAAGGCGCTGATGCAATCGCTGCAAGCTGCTGCGCAGACCCATG TCGAAGGTATTGCGATGCGCTGGCAGTGCGATATCCACGCCGGTGAAGTGCTGTGCAATCGTGACACGCTGGTGGGCGCGCTGCTGAATCTGATTGAAAA CGCGTTACAGGCCGGTACGCCTCAGGTGCGCCTCAAGGTGCATGTGTACGCGCGCGATAACACCTTGCGCCTGTGCGTAAGTGACAGCGCCAGTGGCATC GAGCCTCGGGTGCTGGAACGTTTGGGTGAGCCGTTTTTCACCACTAAAGCTACAGGCACCGGGTTGGGGCTGGCCGTGGTCAAGGCGGTGGTGCGGGCGC ATCAGGGCGAGCTGCAATTCCATTCACGGCTGGGTCGCGGCACCTGCGCGTTGCTCAGCCTGCCGCTGATTCCTGGCGCGGCGGAGGCGAACTGATGGTA
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| DNA Sequence for Gene |
>TU86_RS20925
ATGCGAATCAAAGTGCTGCTGGTTGAAGATGACCGCTCCCTGCGCGAAGCCCTGGCCGACACCTTGTTATTGGCGGGGCATGGTTTTCATGCAGTTGGCT CGGCTGAAGAAGCGCTGGAGGCGGTGGCGGCCGAACCCTTTAGCCTGGTGGTCAGCGACGTGAACATGCCGGGCATGGACGGGCACCAGTTGCTGGGTCT GCTGCGGGCGCGGCAACCGCAACTGCCGGTGCTGCTCATGACCGCGCACGGGGCGGTGGAGCGGGCGGTGGATGCCATGCGCCAAGGCGCAGCGGATTAT CTGGTCAAGCCGTTTGAACCCAAGGCTTTGCTTGATCTGGTGGCGCGCCATGCGCTGGGTTGTCTTGGTGTAGCAGAAGCCGAAGGCCCGGTGGCCATCG AGCCTGCCAGCGCGCAGTTGCTGGAACTGGCGGCGCGGGTAGCGCGCAGTGATTCCACGGTGTTGATCTCGGGCGAGTCCGGCACGGGTAAAGAAGTGCT GGCGCGCTATATCCATCAACATTCGCATCGGACCCGTCAGCCCTTTGTCGCCATCAACTGCGCGGCGATCCCGGACAACATGCTCGAAGCCACGTTGTTC GGTCATGAAAAAGGCTCATTCACCGGTGCGATTGCGGCGCAAGCGGGCAAGTTTGAGCAGGCCGATGGTGGCACGTTGCTGCTCGACGAGATTTCCGAAA TGCCGTTGGGCTTGCAGGCCAAGTTGTTGCGGGTGCTGCAAGAGCGTGAAGTGGAGCGCGTGGGTGGCCGTAAGCCGATTGCCCTGGATATCCGCGTGGT GGCCACCACTAACCGCGATTTGGCGGGCGAAGTGGCGGCGGGGCGCTTTCGCGAAGACTTGTACTATCGCCTTTCGGTGTTTCCGTTGGCTTGGCGCCCG TTGCGCGAGCGCACCGCCGACATTCTGCCGCTGGCCGAGCGCTTGCTGGCCAAGCACATCAGCAAGATGAAACACACGGCCGTGCGTTTTTCGCCCGCCG CACAAGCGTGCCTGACCGCTTATGCCTGGCCTGGGAATGTGCGAGAGCTGGACAACGCGATTCAGCGCGCCCTGATCTTGCAGCACGGGGGCTTGATCGA GGCGGCGGATTTTTGTCTGGCGGGCCCGGTGGCGTGCGCGCCGTTGCCGGCTATCAGCAGCGCCAGTTTGTCGGCGCCCGTCGAGAGCGTGGCGGGGCCC GCAGGGGAGTCCGCAGGCGCGCTGGGCGATGACCTGCGTCGCCGTGAGTTTCAGATGATCATTGACACCTTGCGCACTGAGCGCGGACGGCGCAAAGAAG CGGCCGAGCGCCTGGGCATCAGCCCGCGCACGTTGCGCTACAAACTGGCACAAATGCGCGATGCGGGCATGGACGTTGAAGCGTACCTGTTCGCCTCAAG CTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCCATGCCTGCAGGCACTGAAGCAGGTTGCGGCAGCGCCTACAGGAAGGGTGTTTTTATAAACATCCCGTTTGTCTGGCTGGGACCTTTTGTTACGCAA TTTGTTCCAGATCAACAAACAACTGGCACCCTTGTTGCTAACACCTGAGTAGATGCTGTGTGAGTGTCAAAAAATTGCGGGCCGTCGGAGAGAGTAGTCC ATGAGCCAAGGTATTGAATTTAATCGAATGATGTTGGACATGCGGGCCATGCAAATGGACGCTATGGCCCAGAAATCAGCGGTGCAAGCGCCCGCTGAAG TGGGCGCCAGCAGCTTCTCCGACATGCTGGGCAACGCGATCAATAAGGTCAGCGATACCCAACAGGCGTCGAGCCAGTTGTCGAACGCCTTTGAAATCGG CAAAAGCGGTGTTGACCTGACTGACGTGATGATCGCATCGCAGAAAGCCAGTGTTTCTTTTCAGGCATTGACCCAAGTACGCAACAAGCTGGTTCAGGCG
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| Amino Acid Sequence |
>Fis family transcriptional regulator
MRIKVLLVEDDRSLREALADTLLLAGHGFHAVGSAEEALEAVAAEPFSLVVSDVNMPGMDGHQLLGLLRARQPQLPVLLMTAHGAVERAVDAMRQGAADY LVKPFEPKALLDLVARHALGCLGVAEAEGPVAIEPASAQLLELAARVARSDSTVLISGESGTGKEVLARYIHQHSHRTRQPFVAINCAAIPDNMLEATLF GHEKGSFTGAIAAQAGKFEQADGGTLLLDEISEMPLGLQAKLLRVLQEREVERVGGRKPIALDIRVVATTNRDLAGEVAAGRFREDLYYRLSVFPLAWRP LRERTADILPLAERLLAKHISKMKHTAVRFSPAAQACLTAYAWPGNVRELDNAIQRALILQHGGLIEAADFCLAGPVACAPLPAISSASLSAPVESVAGP AGESAGALGDDLRRREFQMIIDTLRTERGRRKEAAERLGISPRTLRYKLAQMRDAGMDVEAYLFASS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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