Pseudomonas weihenstephanensis DSM 29166, TU86_RS19660 (carB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. DSM 29166 10_154467_40.591, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGCAATCACTGCCATCAAGGAAGTGCTCAACACCGAGATCCCTGTGTTCGGTATCTGCTTGGGTCACCAGTTGCTGGCTCTGGCCTCTGGTGCCAAGACG GTGAAAATGGGTCATGGTCACCACGGTGCCAATCACCCGGTTCAGGACCTGGACACTGGCGTGGTAATGATTACCAGCCAGAACCACGGTTTTGCGGTAG ACGAAGCGAGCTTGCCGGCCAACGTGCGCGCCATTCACAAGTCGCTGTTTGACGGTACGTTGCAAGGCATCGAACTGACCGACAAGAGCGCTTTTAGCTT CCAGGGTCACCCTGAAGCAAGCCCTGGCCCGAACGACGTAGCGCCGCTGTTCGATCGCTTCATCAATGAGATGGCCAAGCGCCGCTGATCGGTTTCCTGC CGTAACGCCTTGTGGCGGTCCCGATTCCGGTGACCCCCGGGCGCTTCAGGAACCTGATTGACAGCTTGCCGACTGACCTGCGGATTTGAGTGACAAACCC
DNA Sequence for Gene
>TU86_RS19660 |carB
ATGCCAAAACGTACAGACATAAAAAGCATCCTGATTCTCGGCGCTGGCCCGATTGTGATCGGCCAGGCGTGCGAATTCGACTACTCCGGCGCCCAGGCCT GTAAAGCCCTGCGTGAAGAGGGTTACCGCGTCATTCTGGTGAACTCCAACCCGGCCACCATCATGACCGACCCGGACATGGCCGACGCGACGTATATCGA GCCGATCAAGTGGCAGACTGTTGCCAAGATCATCGAAAAAGAGCGCCCGGACGCCCTGTTGCCAACCATGGGTGGCCAGACTGCACTGAACTGCGCGCTG GACCTCGAGCGCGAAGGCGTTCTGGAGAAGTTCGGCGTAGAGATGATCGGCGCCAATGCCGACACCATCGACAAAGCCGAAGACCGTTCGCGCTTCGACA AGGCCATGAAGTCCATCGGCCTGGACTGCCCGCGTTCCGGTATTGCCCACACAATGGAAGAGGCCAATGCGGTCCTCGAGCGTCTGGGGTTCCCGTGCAT CATCCGTCCGTCCTTCACGATGGGCGGTACGGGTGGTGGTATCGCTTACAACCGTGAAGAGTTCGAAGAAATCTGTACGCGTGGTCTGGATCTGTCGCCT ACCAAAGAGCTGCTGATCGACGAGTCCCTGATCGGCTGGAAAGAGTACGAGATGGAGGTGGTCCGCGATAAGAAGGACAACTGCATCATCGTGTGCTCAA TCGAAAACTTCGACCCGATGGGTGTGCACACCGGTGACTCGATCACCGTTGCTCCGGCACAAACCCTGACGGACAAGGAATACCAGATCATGCGTAACGC CTCCTTGGCGGTACTGCGTGAGATTGGCGTTGAAACCGGCGGCTCCAACGTTCAGTTCGGCATCTGCCCGGACACCGGTCGCATGGTCGTGATCGAGATG AACCCGCGCGTTTCTCGCTCTTCGGCGCTGGCATCGAAAGCGACCGGCTTCCCGATTGCCCGCATCGCTGCCAAATTGGCCATCGGCTACACCCTGGATG AACTGCAAAACGAAATCACGGGCGGCGCAACGCCTGCGTCCTTCGAGCCGTCCATCGATTATGTTGTAACCAAGTTGCCGCGCTTTGCGTTTGAAAAATT CGCCAAGGCTGACGCGCGTTTGACCACGCAGATGAAATCTGTGGGTGAAGTCATGGCTATTGGCCGGACTTTCCAGGAATCCCTGCAAAAAGCCCTTCGT GGTCTGGAAGTGGGTGTCAGCGGTCTTGATCCCAAGCTGGACCTGAGCAACCCGGAAAGCATGGCCGTGCTCAAGCGCGAGCTGACAGTGCCGGGCGCAG AGCGTATCTGGTACGTAGCTGACGCGTTCCGCGCCGGCATGACCGTTGAAGATATCTTCGGCATGAATATGATTGACCCTTGGTTCCTGGTACAGATCGA AGATCTGATCAAGGACGAAGAAAAAATCAAAACCATGGCCCTGTCCTCGATCAATCGCGACGCCATGTACCGCTTTAAGCGCAAAGGCTTCTCCGATGCA CGCCTGGCCGTATTGCTGGGCGTGACCGAGAAGAACTTGCGCCGCCACCGTCACAAGCTCGAAGTGTTCCCGGTCTACAAGCGCGTTGACACCTGCGCGG CCGAGTTCGCGACAGACACGGCCTACATGTACTCCACCTACGAGGAAGAGTGCGAAGCCAACCCTTCGGATCGTGACAAGATCATGATTCTGGGTGGTGG CCCGAACCGTATCGGCCAGGGTATCGAGTTCGACTATTGCTGCGTTCACGCGGCTCTGGCGCTGCGTGCCGACGGTTACGAGACCATCATGGTCAACTGC AACCCGGAAACCGTTTCCACCGACTACGACACTTCGGATCGCTTGTACTTCGAATCCGTGACCCTGGAAGACGTGTTGGAAATCGTGCGTGTCGAGAAGC CAAAAGGCGTCATCGTTCAGTACGGCGGCCAGACCCCGCTGAAACTGGCGCGCGCTCTGGAAGAAGCGGGTGTGCCGATTATCGGTACCAGCCCTGACGC TATTGACCGTGCAGAAGACCGTGAGCGCTTCCAGCAGATGGTTGAGCGCCTGAACCTGCGTCAGCCGCCTAACGCCACGGTGCGCAGCGAAGACGAAGCT ATTCGTGCTGCTGGCAAGATCGGTTACCCGCTGGTTGTTCGACCTTCCTACGTGTTGGGCGGTCGTGCGATGGAAATCGTCTACGAAGAAGAAGAGCTCA AGCGCTATCTGCGTGACGCGGTGAAAGTGTCCAACGATAGCCCTGTGTTGCTCGATCACTTCCTTAACTGCGCCATCGAAATGGACGTGGATGCTGTCTG CGACGGCACTGATGTGGTGATCGGCGCGATCATGCAGCACATTGAGCAGGCAGGTGTTCACTCGGGTGACTCCGCGTGCTCGCTGCCGCCGTACTCGCTG CCGCTGCACATCCAGGACGAGATGCGCGAGCAGGTCAAGAAGATGGCGCTGGAATTGGGTGTTGTTGGCCTCATGAACGTGCAGTTGGCCTTGCAGGGCG AAGACATCTACGTCATCGAGGTGAACCCTCGTGCTTCGCGTACTGTTCCTTTCGTGTCCAAATGCATCGGCGTTTCCCTGGCAATGATCGCTGCACGCGT CATGGCCGGTAAAACCCTGAAGGAAATTGGTTTCACTAAAGAGATCATTCCTAACTTCTACAGCGTGAAAGAGGCGGTGTTCCCGTTCGCCAAATTCCCG GGTGTCGATCCGATCCTTGGCCCTGAGATGAAGTCCACTGGTGAAGTGATGGGTGTGGGCGATACCTTCGGCGAAGCGTTTGCCAAGGCCCAGATGGGTG CAAGCGAAGTATTGCCAACGGGCGGTACGGCATTCATCAGCGTGCGTGACGATGACAAGCCTCTCGTGGCTGGCGTTGCGCGCGATCTGATTGACCTGGG CTTTGAGATCGTTTCTACGGTTGGCACTGCCAAGTTCATCGAGGCAGCGGGTTTGAAAGTGCGCCGCGTGAACAAAGTGACCGAAGGTCGTCCTCACGTT GTCGATATGATCAAGAATGACGAGGTCACTCTGATCATCAACACGACTGAAGGTCGCCAGTCGATTGCTGACTCTTACTCCATTCGTCGTAACGCTTTGC AGCATAAGATTTACTGCACCACGACCATTGCTGCTGGCGAAGCAATCTGCGAAGCGCTTAAATTCGGTCCTGAAAAAACCGTACGTCGTTTGCAGGATCT ACACGCAGGATTGAAGGCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCAAGTACCCAATGACAGTCCAGGGTGCAAAAGCCCTGGAAGAAGAGCACGCACACCTGACCAAGGTTGTCCGACCAAAGTTGAGCCAGGATATCGGCAC AGCGCGTGAGCTGGGCGACCTTAAGGAAAACGCTGAATACCATGCAGCCCGTGAGCAGCAAGGTATGGTTGAAGCGCGTATCCGTGACATCGAAGGTCGC ATGCAGAATGCCGTGATCATCGATGTAACAACGATTCCTCATACCGGAAAAGTTATTTTCGGTACGACGGTCGAGATCGCCAACGTTGAAACTGACGAAA GCGTTACCTATCAGATCGTTGGCGAAGATGAAGCGGACTTCAAACTCGGAAAAATCTCAGTGGGTTCGCCCCTGGCTCGTGCCTTGATTGCCAAGGAAGA GGGTGATGTCGTGGCGGTGAAAACGCCGGGCGGCGTCATTGAGTACGAAATTGTTAAAGTCAGTCACATCTGAGTGAACGCGCCCGCTTCGTGCGGGCGC
Amino Acid Sequence
>carbamoyl phosphate synthase large subunit
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDMADATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCAL DLEREGVLEKFGVEMIGANADTIDKAEDRSRFDKAMKSIGLDCPRSGIAHTMEEANAVLERLGFPCIIRPSFTMGGTGGGIAYNREEFEEICTRGLDLSP TKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEM NPRVSRSSALASKATGFPIARIAAKLAIGYTLDELQNEITGGATPASFEPSIDYVVTKLPRFAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALR GLEVGVSGLDPKLDLSNPESMAVLKRELTVPGAERIWYVADAFRAGMTVEDIFGMNMIDPWFLVQIEDLIKDEEKIKTMALSSINRDAMYRFKRKGFSDA RLAVLLGVTEKNLRRHRHKLEVFPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSDRDKIMILGGGPNRIGQGIEFDYCCVHAALALRADGYETIMVNC NPETVSTDYDTSDRLYFESVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLARALEEAGVPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEA IRAAGKIGYPLVVRPSYVLGGRAMEIVYEEEELKRYLRDAVKVSNDSPVLLDHFLNCAIEMDVDAVCDGTDVVIGAIMQHIEQAGVHSGDSACSLPPYSL PLHIQDEMREQVKKMALELGVVGLMNVQLALQGEDIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKEIGFTKEIIPNFYSVKEAVFPFAKFP GVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGGTAFISVRDDDKPLVAGVARDLIDLGFEIVSTVGTAKFIEAAGLKVRRVNKVTEGRPHV VDMIKNDEVTLIINTTEGRQSIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTVRRLQDLHAGLKA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site