Pseudomonas helleri DSM 29165, TU84_RS13695
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0009236 | cobalamin biosynthetic process |
Inferred from Sequence Model
Term mapped from: InterPro:MF_00024
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Cellular Component | GO:0016020 | membrane |
Inferred from Sequence Model
Term mapped from: InterPro:MF_00024
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0048472 | threonine-phosphate decarboxylase activity |
Inferred from Sequence Model
Term mapped from: InterPro:MF_00024
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PANTHER | PTHR34308 | COBALAMIN BIOSYNTHESIS PROTEIN CBIB | IPR004485 | Cobalamin biosynthesis CobD/CbiB | 3 | 296 | 4.2E-101 |
| Hamap | MF_00024 | Cobalamin biosynthesis protein CbiB [cbiB]. | IPR004485 | Cobalamin biosynthesis CobD/CbiB | 1 | 302 | 107.992088 |
| Pfam | PF17113 | Regulatory signalling modulator protein AmpE | IPR031347 | Protein AmpE | 81 | 223 | 1.4E-6 |
| Pfam | PF03186 | CobD/Cbib protein | IPR004485 | Cobalamin biosynthesis CobD/CbiB | 8 | 282 | 2.5E-96 |
| NCBIfam | TIGR00380 | JCVI: adenosylcobinamide-phosphate synthase CbiB | IPR004485 | Cobalamin biosynthesis CobD/CbiB | 8 | 259 | 2.2E-57 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.