Strain | Pseudomonas sp. DSM 29165 5_388921_28.3315, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TGCCGCTGGCCAGCGCGCCAGGGCCAGGGGTGATTGTGGTGCGCCCGGCGATTACTGCCGTCAGCAGCCAAACTGAAAGCCTGGCACCTTATGAGTACAT CCCTGTCGCTCTGGTGGCGGCAGCGGTGACGACGGCCTCGGGGATCCGTGATCAGGAAACCCAGTTGTCTACCGAGGCCGTTTTTATCGACGGGAACGAT CAGCATGTTGTTGCTCAAGTGGTGCGCAAAGGCACGGGCAAACCGCTGAGCAATGCCAGCCAGGTGATGAAGGCAGATGACGTGAAAGCAGTGATCGATG GCTGGGCGTCGGACATGCGCCAGTCATTTCAGAAGGTCAAGGATTAGAAGAGCCCTGGCACGCGGCGACATCCCTTTGGCAGTGCCGGGCCCCTCTTTTT GTCACACCCGGCATGACAATTTGTGCTCCGGGCATAGGTCGCGTGCGCGTTTCGTGTTTAACTTCCGGCTCTTCAAAAACAGTTAAAAAGGACATCGTTC
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DNA Sequence for Gene |
>TU84_RS10465
|tpx
ATGGCTCAAGTGACGCTTAAAGGCAACCCTGTTCAAGTCGACGGCGTGCTGCCTGCAGTAGGTTCCAAAGCGCCAGCGTTTTCGCTGGTTGCCGGTAATT TGTCCGATGTAACGCTGGCCGATTTTGCCGGTAAGCGTAAAGTGCTGAACATCTTCCCAAGCGTTGACACCCCGACCTGCGCAACGTCGGTACGCAAGTT CAACGCACAAGCCAACGAACTGGCCAACACCGTGGTGCTGTGCATTTCGGCTGACCTGCCATTCGCTCAAGCGCGTTTCTGCGGTGCTGAAGGTCTGGAA AACGTACAAAACCTGTCGACGCTGCGCGGTGCCGAGTTCATCAAGAACTACGGTGTGGCAATCGCTGATGGCCCGCTCAAAGGCCTGACTGCTCGCGCAG TGGTTGTACTGGACGAAAACGACACTGTGCTGCACAGCGAACTGGTTAAAGAAATCGCTGAAGAGCCTAACTACGAAGCAGCTCTGGCTGTTTTGAAGTA A
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GTCGTACAGCAACACCGAAAACGGCCTGGCATTGAATGCCAGGCCGTTTTTTATTGCCCGTAAAGATCAAATAATCAAACCGGCCTACATAATGTCACAC AGGTTCTAGACACTCTGCGCGGCACAATTGAGGCAAGGGCTGCCTCAAGTCTGGATTATTTGAGGTTGAGTGTTGGTGTTGGAAACTAAACAGATCAAAG TCCGGGCAGGCCCTTGTCGTGAATGTAAAGCAGGTCTTTGACGCGCTATAACGTAAATAGCCGGTAAAGAGCCTTTTCATAACTGTCTGCACTGCTTATC TTTCAGGCTCCTGAAATTAAGCGCTCGCGCCCAACTGGTTGATCACTCAATGCAATCCTCTGTTTCTCGCACTTCTCGTCGCTGGCTGGTTGGCCTGCTG ATTTTGCTGATCGTTGCTGGCGTGAGCTGGTGGCTTTGGCCCGCATCGGCGAAAAAAGGCCAGAACGCGCAACCCGCCGGGCACACCAGCCGCACGGGGG
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Amino Acid Sequence |
>peroxidase
MAQVTLKGNPVQVDGVLPAVGSKAPAFSLVAGNLSDVTLADFAGKRKVLNIFPSVDTPTCATSVRKFNAQANELANTVVLCISADLPFAQARFCGAEGLE NVQNLSTLRGAEFIKNYGVAIADGPLKGLTARAVVVLDENDTVLHSELVKEIAEEPNYEAALAVLK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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